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L2_047_000M1_scaffold_746

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_746_1
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(517..1116)
DNA (600bp) protein (200aa)
Stage II sporulation protein R n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LJ52_9FIRM
Stage II sporulation protein R {ECO:0000313|EMBL:EOS58760.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
stage II sporulation protein R
L2_047_000M1_scaffold_746_2
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1380..2903)
DNA (1524bp) protein (508aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YMB8_9FIRM
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
L2_047_000M1_scaffold_746_3
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2918..3685)
DNA (768bp) protein (256aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
tpiA; Triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=2 Tax=Clostridium RepID=A7VRE5_9CLOT
L2_047_000M1_scaffold_746_4
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(4023..5234)
DNA (1212bp) protein (404aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YMC2_9FIRM
L2_047_000M1_scaffold_746_5
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5348..5854)
DNA (507bp) protein (169aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium sp. CAG:242 RepID=R6D277_9CLOT
L2_047_000M1_scaffold_746_6
unknown

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6216..6710
DNA (495bp) protein (165aa)

This feature has no annotations

L2_047_000M1_scaffold_746_7
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6710..7990
DNA (1281bp) protein (427aa)
Phage terminase large subunit PBSX family n=1 Tax=Clostridium sp. CAG:413 RepID=R6NPX2_9CLOT
Phage terminase large subunit PBSX family {ECO:0000313|EMBL:CDC10414.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
phage terminase, large subunit, PBSX family
L2_047_000M1_scaffold_746_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8252..9409
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10913.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein predicted by Glimmer/Critica
L2_047_000M1_scaffold_746_9
unknown

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9406..9546
DNA (141bp) protein (47aa)

This feature has no annotations

L2_047_000M1_scaffold_746_10
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9543..10508
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LB54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56014.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein predicted by Glimmer/Critica
L2_047_000M1_scaffold_746_11
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10531..11544
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6C9T5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA62077.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Phage capsid family.
L2_047_000M1_scaffold_746_12
unknown

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11580..11933
DNA (354bp) protein (118aa)

This feature has no annotations

L2_047_000M1_scaffold_746_13
unknown

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11924..12352
DNA (429bp) protein (143aa)

This feature has no annotations

L2_047_000M1_scaffold_746_14
unknown

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12349..12735
DNA (387bp) protein (129aa)

This feature has no annotations

L2_047_000M1_scaffold_746_15
unknown

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12865..13086
DNA (222bp) protein (74aa)

This feature has no annotations

L2_047_000M1_scaffold_746_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13103..13483
DNA (381bp) protein (127aa)
LysM domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3F0_9CLOT
LysM domain protein {ECO:0000313|EMBL:CDA78621.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L2_047_000M1_scaffold_746_17
unknown

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13473..13685
DNA (213bp) protein (71aa)

This feature has no annotations

L2_047_000M1_scaffold_746_18
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13675..14631
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LB45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56004.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L2_047_000M1_scaffold_746_19
unknown

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15122..16372
DNA (1251bp) protein (417aa)

This feature has no annotations

L2_047_000M1_scaffold_746_20
Lysinibacillus massiliensis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(16799..17482)
DNA (684bp) protein (228aa)
cro regulatory protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI00030E102E
Transcriptional regulator {ECO:0000313|EMBL:KGR91029.1}; TaxID=1211035 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529.;"
HipB; putative transcriptional regulator
L2_047_000M1_scaffold_746_21
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17963..18736
DNA (774bp) protein (258aa)
Metallophosphoesterase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LYB1_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:EOS63301.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
ymdB; putative protein ymdB
L2_047_000M1_scaffold_746_22
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18861..19208
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CHH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA76128.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L2_047_000M1_scaffold_746_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19278..20954
DNA (1677bp) protein (559aa)
DAK2 domain fusion protein YloV n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDV8_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EDS10147.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DAK2 domain fusion protein YloV
L2_047_000M1_scaffold_746_24
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21163..21966)
DNA (804bp) protein (268aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LWM5_9FIRM
his Kinase A domain protein
L2_047_000M1_scaffold_746_25
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22237..23256
DNA (1020bp) protein (340aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
GPD1; Glyceraldehyde-3-phosphate dehydrogenase 1 (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase 2 n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LVU3_9FIRM
L2_047_000M1_scaffold_746_26
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23373..24743)
DNA (1371bp) protein (457aa)
Amino acid transporter n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FZI0_9FIRM
Amino acid transporter {ECO:0000313|EMBL:CDE19112.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
hypothetical protein
L2_047_000M1_scaffold_746_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25048..25377)
DNA (330bp) protein (110aa)
Cupin domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIE3_9FIRM
Cupin domain protein {ECO:0000313|EMBL:EFB77528.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
L2_047_000M1_scaffold_746_28
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25724..26275)
DNA (552bp) protein (184aa)
Shikimate kinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IG45_9FIRM
Shikimate kinase {ECO:0000313|EMBL:CDE50436.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
shikimate kinase
L2_047_000M1_scaffold_746_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26382..27806)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26986.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Site-specific recombinase XerD
L2_047_000M1_scaffold_746_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27770..28942)
DNA (1173bp) protein (391aa)
Putative site-specific recombinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRD3_9FIRM
Putative site-specific recombinase {ECO:0000313|EMBL:CDB26985.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative site-specific recombinase
Displaying items 1-30 of 31 in total

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