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L2_047_000M1_scaffold_788

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_788_1
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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120..998
DNA (879bp) protein (293aa)
Aldose 1-epimerase n=1 Tax=Coprococcus comes CAG:19 RepID=R6MJM1_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:CDB86017.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
putative mutarotase
L2_047_000M1_scaffold_788_2
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1079..1660
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=2 Tax=Coprococcus RepID=R6LEX6_9FIRM
L2_047_000M1_scaffold_788_3
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1885..2766)
DNA (882bp) protein (294aa)
Proline iminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; Short=PIP {ECO:0000256|PIRNR:PIRNR005539};; EC=3.4.11.5 {ECO:0000256|PIRNR:PIRNR005539};; Prolyl aminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Proline iminopeptidase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LR26_9FIRM
proline-specific peptidase
L2_047_000M1_scaffold_788_4
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3449..3937
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BEZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG87842.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Predicted membrane protein
L2_047_000M1_scaffold_788_5
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4135..5730
DNA (1596bp) protein (532aa)
Response regulator receiver domain protein n=2 Tax=Coprococcus RepID=R6LAT7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDB84593.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
two component transcriptional regulator, AraC family
L2_047_000M1_scaffold_788_6
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5717..7441
DNA (1725bp) protein (575aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Coprococcus RepID=C0BEZ4_9FIRM
histidine kinase internal region
L2_047_000M1_scaffold_788_7
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7428..8447
DNA (1020bp) protein (340aa)
Sugar-binding domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LFN1_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:CDB84595.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
periplasmic binding protein/LacI transcriptional regulator
L2_047_000M1_scaffold_788_8
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8680..9813
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BEZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG87837.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
periplasmic binding protein/LacI transcriptional regulator
L2_047_000M1_scaffold_788_9
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9951..11447
DNA (1497bp) protein (499aa)
Galactose/methyl galactoside import ATP-binding protein MglA {ECO:0000256|HAMAP-Rule:MF_01717}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01717};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Galactoside ABC transporter ATP-binding protein n=2 Tax=Coprococcus RepID=R6MF78_9FIRM
ABC transporter
L2_047_000M1_scaffold_788_10
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11478..12548
DNA (1071bp) protein (357aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Coprococcus RepID=C0BEY8_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDB84598.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_047_000M1_scaffold_788_11
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12571..12840
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BEY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG87832.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L2_047_000M1_scaffold_788_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12943..16935
DNA (3993bp) protein (1331aa)
lacZ; beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C4Q7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22052.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L2_047_000M1_scaffold_788_13
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16880..18277
DNA (1398bp) protein (466aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BEY5_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEG87830.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
beta-galactosidase BbgIII
L2_047_000M1_scaffold_788_14
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18426..19124
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=2 Tax=Coprococcus RepID=C0BEY4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDB84600.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
winged helix family two component transcriptional regulator
L2_047_000M1_scaffold_788_15
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19133..21739
DNA (2607bp) protein (869aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BEY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG87827.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Signal transduction histidine kinase
L2_047_000M1_scaffold_788_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21848..23014
DNA (1167bp) protein (389aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23373.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_047_000M1_scaffold_788_17
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23051..25564
DNA (2514bp) protein (838aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BEX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG87822.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L2_047_000M1_scaffold_788_18
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25580..27400
DNA (1821bp) protein (607aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Fructose-1,6-bisphosphatase class 3 n=2 Tax=Coprococcus RepID=C0BEX5_9FIRM
fructose-1,6-bisphosphatase III
L2_047_000M1_scaffold_788_19
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27402..28625
DNA (1224bp) protein (408aa)
ABC transporter solute-binding protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LR18_9FIRM
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDB84636.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
sugar ABC transporter periplasmic protein
L2_047_000M1_scaffold_788_20
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28622..30313
DNA (1692bp) protein (564aa)
HAMP domain protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BEX3_9FIRM
HAMP domain protein {ECO:0000313|EMBL:EEG87818.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
integral membrane sensor signal transduction histidine kinase
L2_047_000M1_scaffold_788_21
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30294..31820
DNA (1527bp) protein (509aa)
Response regulator receiver domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LAX1_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDB84638.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
AraC family transcriptional regulator
L2_047_000M1_scaffold_788_22
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31919..33358
DNA (1440bp) protein (480aa)
Transporter major facilitator family protein n=2 Tax=Coprococcus RepID=R6LM36_9FIRM
Transporter major facilitator family protein {ECO:0000313|EMBL:CDB84639.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
xylP; putative xylose-proton symporter XylP
L2_047_000M1_scaffold_788_23
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33432..34295)
DNA (864bp) protein (288aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LFR3_9FIRM
L2_047_000M1_scaffold_788_24
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34602..35678
DNA (1077bp) protein (359aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Coprococcus RepID=C0BEW5_9FIRM
6-phosphofructokinase 2 {ECO:0000313|EMBL:CDB84641.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_047_000M1_scaffold_788_25
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35693..36064
DNA (372bp) protein (124aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EEG87809.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEG87809.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=2 Tax=Coprococcus RepID=C0BEW4_9FIRM
Displaying 25 items

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