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L2_047_000M1_scaffold_790

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_790_1
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(2..859)
DNA (858bp) protein (286aa)
Efflux ABC transporter, permease protein n=2 Tax=root RepID=D2ZQ18_METSM
peptide ABC transporter permease
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFC93365.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
L2_047_000M1_scaffold_790_2
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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comp(973..2355)
DNA (1383bp) protein (461aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UNX1_9STAP
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
dnaA; Chromosomal replication initiator protein DnaA
L2_047_000M1_scaffold_790_3
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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2583..3698
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TRN9_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC72479.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_790_4
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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3788..3922
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=2 Tax=Firmicutes RepID=R6TX59_9STAP
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
50S ribosomal protein L34
L2_047_000M1_scaffold_790_5
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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4007..4363
DNA (357bp) protein (119aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rnpA; Ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TRP6_9STAP
L2_047_000M1_scaffold_790_6
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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4353..5753
DNA (1401bp) protein (467aa)
Integral membrane protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TX64_9STAP
Integral membrane protein {ECO:0000313|EMBL:CDC72486.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
membrane insertion protein
L2_047_000M1_scaffold_790_7
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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5771..6409
DNA (639bp) protein (213aa)
Single-stranded nucleic acid binding protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TGF8_9STAP
Single-stranded nucleic acid binding protein {ECO:0000313|EMBL:CDC72488.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
R3H domain protein
L2_047_000M1_scaffold_790_8
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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6705..8066
DNA (1362bp) protein (454aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
mnmE_2; tRNA modification GTPase MnmE (EC:3.6.-.-)
tRNA modification GTPase MnmE n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TJR3_9STAP
L2_047_000M1_scaffold_790_9
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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8389..9777
DNA (1389bp) protein (463aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UNZ2_9STAP
L2_047_000M1_scaffold_790_10
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9804..10085
DNA (282bp) protein (94aa)
TfoX domain-containing protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XGR3_9FIRM
TfoX domain-containing protein {ECO:0000313|EMBL:EFV19510.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Regulator of competence-specific genes
L2_047_000M1_scaffold_790_11
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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comp(10238..11347)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UP19_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC72502.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_790_12
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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11528..11914
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TRU9_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC72504.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
hypothetical protein
L2_047_000M1_scaffold_790_13
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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11907..12383
DNA (477bp) protein (159aa)
Putative integral membrane protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TJU9_9STAP
Putative integral membrane protein {ECO:0000313|EMBL:CDC72505.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
nfeD; putative nodulation efficiency protein D
L2_047_000M1_scaffold_790_14
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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12412..13449
DNA (1038bp) protein (346aa)
Membrane protease subunit stomatin/prohibitin-like protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UP21_9STAP
Membrane protease subunit stomatin/prohibitin-like protein {ECO:0000313|EMBL:CDC72507.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
hypothetical protein
L2_047_000M1_scaffold_790_15
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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13568..16459
DNA (2892bp) protein (964aa)
dnaX_2; DNA polymerase III subunit tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TJV2_9STAP
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:CDC72510.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_790_16
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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16460..16759
DNA (300bp) protein (100aa)
Nucleoid-associated protein Clocl_0138 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UP24_9STAP
Nucleoid-associated protein Clocl_0138 {ECO:0000313|EMBL:CDC72512.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
hypothetical protein
L2_047_000M1_scaffold_790_17
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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16778..17374
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TJV6_9STAP
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
recR; DNA repair and recombination protein
L2_047_000M1_scaffold_790_18
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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17386..17622
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UP28_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC72517.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_790_19
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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17829..18890
DNA (1062bp) protein (354aa)
sugC; Trehalose import ATP-binding protein SugC (EC:3.6.3.-)
ABC-type maltose/maltodextrin transport system ATP-binding protein MalK n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TJV9_9STAP
ABC-type maltose/maltodextrin transport system ATP-binding protein MalK {ECO:0000313|EMBL:CDC72520.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_790_20
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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18892..19863
DNA (972bp) protein (324aa)
ABC transporter permease n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TGK9_9STAP
ABC transporter permease {ECO:0000313|EMBL:CDC72523.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
Sugar ABC-type transport system, permease component
L2_047_000M1_scaffold_790_21
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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19875..20891
DNA (1017bp) protein (339aa)
ABC-type transport system permease component n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TJW2_9STAP
ABC-type transport system permease component {ECO:0000313|EMBL:CDC72525.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
ABC-type (sugar) transport system, permease component
L2_047_000M1_scaffold_790_22
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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20952..22349
DNA (1398bp) protein (466aa)
ABC transporter substrate-binding protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TJW5_9STAP
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDC72530.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
ABC-type transport system, substrate-binding component
L2_047_000M1_scaffold_790_23
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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22384..23736
DNA (1353bp) protein (451aa)
nucH; Thermonuclease precursor (EC:3.1.31.1)
Putative DNase/RNase endonuclease n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TJW8_9STAP
Putative DNase/RNase endonuclease {ECO:0000313|EMBL:CDC72535.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_790_24
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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23880..26630
DNA (2751bp) protein (917aa)
Hypothetical surface-anchored protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UP41_9STAP
Hypothetical surface-anchored protein {ECO:0000313|EMBL:CDC72537.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_790_25
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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26730..27632
DNA (903bp) protein (301aa)
DHHA1 domain protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TRX9_9STAP
DHHA1 domain protein {ECO:0000313|EMBL:CDC72539.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
Phosphoesterase
L2_047_000M1_scaffold_790_26
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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27610..28608
DNA (999bp) protein (333aa)
DHH family protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UP45_9STAP
DHH family protein {ECO:0000313|EMBL:CDC72542.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
hypothetical protein
L2_047_000M1_scaffold_790_27
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

28598..29338
DNA (741bp) protein (247aa)
stationary-phase survival protein SurE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TJY0_9STAP
5'-nucleotidase SurE {ECO:0000313|EMBL:CDC72545.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_790_28
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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29377..29565
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TGM3_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC72548.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
bofA; pro-sigmaK processing inhibitor BofA family protein
L2_047_000M1_scaffold_790_29
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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29578..29970
DNA (393bp) protein (131aa)
Conserved protein YwiB n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TXE8_9STAP
Conserved protein YwiB {ECO:0000313|EMBL:CDC72551.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_790_30
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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30052..30558
DNA (507bp) protein (169aa)
Putative DNA-directed RNA polymerase delta subunit n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TRY9_9STAP
Putative DNA-directed RNA polymerase delta subunit {ECO:0000313|EMBL:CDC72554.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
DNA-directed RNA polymerase subunit delta
Displaying items 1-30 of 32 in total

View Taxonomy