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L2_047_000M1_scaffold_802

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_802_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(77..1465)
DNA (1389bp) protein (463aa)
Transcriptional regulator GntR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8A8_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCZ24808.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator, GntR family
L2_047_000M1_scaffold_802_2
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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1579..2454
DNA (876bp) protein (292aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-)
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BFD7_9FIRM
L2_047_000M1_scaffold_802_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2454..3029
DNA (576bp) protein (192aa)
pyridoxal phosphate synthase yaaE subunit (EC:2.6.-.-)
Glutamine amidotransferase subunit PdxT n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVQ4_9FIRM
Glutamine amidotransferase subunit PdxT {ECO:0000313|EMBL:CCZ25087.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_802_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3069..3575
DNA (507bp) protein (169aa)
Transcriptional regulator n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSA7_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ25086.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
AraC-type DNA-binding domain-containing proteins
L2_047_000M1_scaffold_802_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3920..4282
DNA (363bp) protein (121aa)
Alpha amylase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8P6_9FIRM
Alpha amylase {ECO:0000313|EMBL:CCZ25085.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
alpha amylase
L2_047_000M1_scaffold_802_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4466..5575
DNA (1110bp) protein (370aa)
Alpha amylase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8P6_9FIRM
Alpha amylase {ECO:0000313|EMBL:CCZ25085.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
alpha amylase
L2_047_000M1_scaffold_802_7
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5590..6615)
DNA (1026bp) protein (342aa)
Dihydrodipicolinate reductase domain protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GM88_9FIRM
Dihydrodipicolinate reductase domain protein {ECO:0000313|EMBL:CDE27082.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
dihydrodipicolinate reductase
L2_047_000M1_scaffold_802_8
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6676..7515)
DNA (840bp) protein (280aa)
Transcriptional regulator, MerR family n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NVH1_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEF92794.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
hypothetical protein
L2_047_000M1_scaffold_802_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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7844..8542
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUU5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM61764.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
DNA-binding response regulator
L2_047_000M1_scaffold_802_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8554..10755
DNA (2202bp) protein (734aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNQ6_9FIRM
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:CCZ23831.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
sensor histidine kinase
L2_047_000M1_scaffold_802_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10963..12096)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AMX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46189.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
integrase
L2_047_000M1_scaffold_802_12
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12262..13053)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F6M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46167.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
L2_047_000M1_scaffold_802_13
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13072..13995)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RNH1_9FIRM
Restriction endonuclease {ECO:0000313|EMBL:EXM39690.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
restriction endonuclease
L2_047_000M1_scaffold_802_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14085..14918)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MN95_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35228.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_802_15
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14922..15560)
DNA (639bp) protein (213aa)
DNA-binding helix-turn-helix protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NR67_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEF94237.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
phage repressor like transcriptional regulator, XRE family
L2_047_000M1_scaffold_802_16
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15707..15925
DNA (219bp) protein (73aa)
DNA-binding helix-turn-helix protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NR68_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEF94238.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
transcriptional regulator
L2_047_000M1_scaffold_802_17
unknown

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16115..16399
DNA (285bp) protein (95aa)

This feature has no annotations

L2_047_000M1_scaffold_802_18
unknown

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16417..16641
DNA (225bp) protein (75aa)

This feature has no annotations

L2_047_000M1_scaffold_802_19
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16645..16920
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NR70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF94240.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
L2_047_000M1_scaffold_802_20
unknown

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16945..17205
DNA (261bp) protein (87aa)

This feature has no annotations

L2_047_000M1_scaffold_802_21
unknown

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17475..17849
DNA (375bp) protein (125aa)

This feature has no annotations

L2_047_000M1_scaffold_802_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17833..19137
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93886.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L2_047_000M1_scaffold_802_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19137..20258
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QX74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93887.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L2_047_000M1_scaffold_802_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20271..20753
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RHF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46171.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_047_000M1_scaffold_802_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20753..22363
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QX76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93889.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
type III restriction protein res subunit
L2_047_000M1_scaffold_802_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22366..24624
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AMV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46169.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
primase
L2_047_000M1_scaffold_802_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24814..25236
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AMV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46167.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
endodeoxyribonuclease RusA
L2_047_000M1_scaffold_802_28
Facklamia hominis, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25223..25645
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Facklamia hominis CCUG 36813 RepID=K1MEJ1_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EKB54484.1}; TaxID=883111 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia hominis CCUG 36813.;"
L2_047_000M1_scaffold_802_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25810..26283
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R0Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91833.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_047_000M1_scaffold_802_30
unknown

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26302..26517
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

View Taxonomy