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L2_047_000M1_scaffold_848

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_848_1
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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170..1651
DNA (1482bp) protein (494aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=2 Tax=Coprococcus RepID=C0B586_9FIRM
L2_047_000M1_scaffold_848_2
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1712..2425
DNA (714bp) protein (238aa)
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) n=2 Tax=Coprococcus RepID=R6LDL0_9FIRM
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) {ECO:0000313|EMBL:CDB85568.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
L2_047_000M1_scaffold_848_3
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2571..4007
DNA (1437bp) protein (479aa)
Predicted dehydrogenase n=1 Tax=Coprococcus comes CAG:19 RepID=R6MI54_9FIRM
Predicted dehydrogenase {ECO:0000313|EMBL:CDB85567.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Predicted dehydrogenase
L2_047_000M1_scaffold_848_4
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4025..5293
DNA (1269bp) protein (423aa)
Thioredoxin reductase (EC:1.5.3.1)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Coprococcus RepID=C0B590_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEG91387.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L2_047_000M1_scaffold_848_5
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5297..5656
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0B591_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG91388.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Uncharacterized protein with conserved CXXC pairs
L2_047_000M1_scaffold_848_6
unknown

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5681..5833
DNA (153bp) protein (51aa)

This feature has no annotations

L2_047_000M1_scaffold_848_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5994..7118
DNA (1125bp) protein (375aa)
Uncharacterised Sugar-binding Domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M387_9FIRM
Uncharacterised Sugar-binding Domain.
Uncharacterised Sugar-binding Domain {ECO:0000313|EMBL:CBL25699.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_848_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7341..8915
DNA (1575bp) protein (525aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q294_9FIRM
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CDC16062.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type dipeptide transport system, periplasmic component
L2_047_000M1_scaffold_848_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8912..10573
DNA (1662bp) protein (554aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M385_9FIRM
ATPase components of various ABC-type transport systems, contain duplicated ATPase
ATPase components of various ABC-type transport systems, contain duplicated ATPase {ECO:0000313|EMBL:CBL25697.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_848_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10554..11540
DNA (987bp) protein (329aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=1 Tax=Ruminococcus torques L2-14 RepID=D4M384_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:CBL25696.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_848_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11551..12435
DNA (885bp) protein (295aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=1 Tax=Ruminococcus torques L2-14 RepID=D4M383_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:CBL25695.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_848_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12544..13155
DNA (612bp) protein (204aa)
Selenium metabolism protein YedF n=1 Tax=Ruminococcus torques L2-14 RepID=D4M382_9FIRM
selenium metabolism protein YedF
Selenium metabolism protein YedF {ECO:0000313|EMBL:CBL25694.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_848_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13458..14087
DNA (630bp) protein (210aa)
selenium donor protein (EC:2.7.9.3)
Selenium donor protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q2A3_9FIRM
Selenium donor protein {ECO:0000313|EMBL:CDC16072.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_848_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14250..14339
DNA (90bp) protein (30aa)
selenium donor protein (EC:2.7.9.3)
Selenium donor protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M380_9FIRM
Selenium donor protein {ECO:0000313|EMBL:CDC16072.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_848_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14433..15980
DNA (1548bp) protein (516aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NVC8_9FIRM
L2_047_000M1_scaffold_848_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16017..17963
DNA (1947bp) protein (649aa)
Selenocysteine-specific elongation factor SelB n=1 Tax=Ruminococcus torques L2-14 RepID=D4M379_9FIRM
Selenocysteine-specific elongation factor SelB {ECO:0000313|EMBL:CBL25691.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
selenocysteine-specific elongation factor SelB
L2_047_000M1_scaffold_848_17
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17975..18910
DNA (936bp) protein (312aa)
Transcriptional regulator LysR family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NVD7_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDC16083.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
transcriptional regulator, LysR family
L2_047_000M1_scaffold_848_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19062..20189
DNA (1128bp) protein (376aa)
Cysteine desulfurase family protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NY45_9FIRM
Cysteine desulfurase family protein {ECO:0000313|EMBL:CDC16085.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
cysteine desulfurase family protein
L2_047_000M1_scaffold_848_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20209..21306
DNA (1098bp) protein (366aa)
YeeE/YedE family (DUF395) n=2 Tax=Clostridiales RepID=D4M376_9FIRM
YeeE/YedE family (DUF395).
YeeE/YedE family (DUF395) {ECO:0000313|EMBL:CDC16087.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_848_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21320..21523
DNA (204bp) protein (68aa)
Predicted redox protein, regulator of disulfide bond formation n=2 Tax=Clostridiales RepID=D4M375_9FIRM
Predicted redox protein, regulator of disulfide bond formation
Predicted redox protein regulator of disulfide bond formation {ECO:0000313|EMBL:CDC16090.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_848_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21590..22429
DNA (840bp) protein (280aa)
Uncharacterized conserved protein n=2 Tax=Clostridiales RepID=D4M374_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC16092.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_848_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22429..22875
DNA (447bp) protein (149aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M373_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL25685.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_848_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22876..23112
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6NVF2_9FIRM
Protein of unknown function (DUF3343).
Uncharacterized protein {ECO:0000313|EMBL:CDC16098.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_848_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23218..23388
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M371_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25683.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_848_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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23385..24542
DNA (1158bp) protein (386aa)
Uncharacterized flavoproteins n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NY56_9FIRM
Uncharacterized flavoproteins {ECO:0000313|EMBL:CDC16100.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Uncharacterized flavoproteins
L2_047_000M1_scaffold_848_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24602..26029
DNA (1428bp) protein (476aa)
Iron-only hydrogenase maturation protein HydF n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q2D0_9FIRM
Iron-only hydrogenase maturation protein HydF {ECO:0000313|EMBL:CDC16102.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
iron-only hydrogenase maturation protein HydF
L2_047_000M1_scaffold_848_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27059..27376
DNA (318bp) protein (106aa)
30S ribosomal protein S10 n=3 Tax=Clostridiales RepID=D4M367_9FIRM
SSU ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L2_047_000M1_scaffold_848_28
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27463..28146
DNA (684bp) protein (228aa)
50S ribosomal protein L3 n=1 Tax=Ruminococcus torques L2-14 RepID=D4M366_9FIRM
LSU ribosomal protein L3P
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_848_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


28177..28797
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Ruminococcus torques L2-14 RepID=D4M365_9FIRM
LSU ribosomal protein L4P
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_848_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


28797..29096
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=3 Tax=Clostridiales RepID=D4M364_9FIRM
Ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Displaying items 1-30 of 34 in total

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