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L2_047_000M1_scaffold_870

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_870_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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1..708
DNA (708bp) protein (236aa)
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IWU8_9FIRM
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CCY41191.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L2_047_000M1_scaffold_870_2
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(848..2209)
DNA (1362bp) protein (454aa)
Putative secreted protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QSP3_9FIRM
Putative secreted protein {ECO:0000313|EMBL:CDC38885.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
putative secreted protein
L2_047_000M1_scaffold_870_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2293..2877)
DNA (585bp) protein (195aa)
Transcriptional regulator TetR family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6D2_9FIRM
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCO04314.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_000M1_scaffold_870_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(3191..4411)
DNA (1221bp) protein (407aa)
Peptidase propeptide and YPEB domain protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXN9_9FIRM
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:CCX72653.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_870_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(4408..4983)
DNA (576bp) protein (192aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S5A2_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CCZ45994.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
RNA polymerase sigma factor, sigma-70 family
L2_047_000M1_scaffold_870_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(5244..6101)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81628.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
EDD domain protein, DegV family
L2_047_000M1_scaffold_870_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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6229..6921
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUL7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA81627.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_047_000M1_scaffold_870_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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6908..7969
DNA (1062bp) protein (354aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
phoR1; alkaline phosphatase synthesis sensor protein PhoR (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBS5_9FIRM
L2_047_000M1_scaffold_870_9
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8065..8721
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GIM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB14032.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
PAP2 superfamily protein
L2_047_000M1_scaffold_870_10
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8718..9515
DNA (798bp) protein (266aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DV12_9FIRM
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDA88724.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_047_000M1_scaffold_870_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9826..10755
DNA (930bp) protein (310aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=2 Tax=Oscillibacter RepID=U2QFZ6_9FIRM
L2_047_000M1_scaffold_870_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

10759..11634
DNA (876bp) protein (292aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2B0_9FIRM
Serine O-acetyltransferase {ECO:0000313|EMBL:CCX74385.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L2_047_000M1_scaffold_870_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(11921..13120)
DNA (1200bp) protein (400aa)
YibE/F-like protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D935_9FIRM
YibE/F-like protein {ECO:0000313|EMBL:CCX75334.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
transmembrane protein
L2_047_000M1_scaffold_870_14
unknown

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comp(13214..13336)
DNA (123bp) protein (41aa)

This feature has no annotations

L2_047_000M1_scaffold_870_15
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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13593..20474
DNA (6882bp) protein (2294aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D511_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75335.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
OB-fold tRNA/helicase-type nucleic acid binding-protein
L2_047_000M1_scaffold_870_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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20779..21390
DNA (612bp) protein (204aa)
2'-5' RNA ligase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1T0_9FIRM
2'-5' RNA ligase {ECO:0000313|EMBL:CDA81775.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_870_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

21583..24450
DNA (2868bp) protein (956aa)
5'-nucleotidase domain-containing protein (EC:3.1.3.5)
5'-nucleotidase domain-containing protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7H9_9FIRM
5'-nucleotidase domain-containing protein {ECO:0000313|EMBL:CCX72802.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L2_047_000M1_scaffold_870_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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24860..25750
DNA (891bp) protein (297aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M418_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF16741.1}; Flags: Fragment;; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_047_000M1_scaffold_870_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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25766..25978
DNA (213bp) protein (71aa)
Uncharacterized protein n=9 Tax=Bacteria RepID=E9SR47_CLOSY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF16740.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_047_000M1_scaffold_870_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26021..26497
DNA (477bp) protein (159aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=E9SR46_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06677.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_047_000M1_scaffold_870_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26494..27165
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJZ1_9FIRM
conjugal transfer protein TraG
Uncharacterized protein {ECO:0000313|EMBL:EHF06573.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L2_047_000M1_scaffold_870_22
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27117..28298
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJJ8_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG50108.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
conjugal transfer protein TraG
L2_047_000M1_scaffold_870_23
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28327..28554
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJC6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG50109.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
antitoxin
L2_047_000M1_scaffold_870_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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28651..28866
DNA (216bp) protein (72aa)
Uncharacterized protein n=10 Tax=root RepID=A8RQC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00790.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L2_047_000M1_scaffold_870_25
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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28938..29801
DNA (864bp) protein (288aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=B9YBW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66516.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L2_047_000M1_scaffold_870_26
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29925..30386
DNA (462bp) protein (154aa)
site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72)
MT-A70 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBW2_9FIRM
MT-A70 {ECO:0000313|EMBL:EEF66517.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L2_047_000M1_scaffold_870_27
unknown

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comp(30420..30722)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=UPI000366BC29
L2_047_000M1_scaffold_870_28
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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30745..33150
DNA (2406bp) protein (802aa)
Uncharacterized protein n=2 Tax=root RepID=B9YBW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66519.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Type IV secretory pathway, VirB4 component
L2_047_000M1_scaffold_870_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33147..34067
DNA (921bp) protein (307aa)
Site-specific DNA methylase (EC:2.1.1.37)
C-5 cytosine-specific DNA methylase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQZ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06564.1}; Flags: Fragment;; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L2_047_000M1_scaffold_870_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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34055..36010
DNA (1956bp) protein (652aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67701.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
DNA-repair protein
Displaying items 1-30 of 33 in total

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