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L2_047_000M1_scaffold_920

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_920_1
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..250
DNA (249bp) protein (83aa)
ABC-type (unclassified) transport system, ATPase component (EC:3.6.3.-)
ABC-type (Unclassified) transport system, ATPase component n=2 Tax=Alistipes RepID=D4ILI5_9BACT
ABC-type (Unclassified) transport system ATPase component {ECO:0000313|EMBL:CCZ95954.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_920_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

253..1497
DNA (1245bp) protein (415aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILI4_9BACT
L2_047_000M1_scaffold_920_3
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1513..2490
DNA (978bp) protein (326aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Chorismate synthase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILI3_9BACT
L2_047_000M1_scaffold_920_4
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2487..3326
DNA (840bp) protein (280aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Release factor glutamine methyltransferase n=2 Tax=Alistipes RepID=D4ILI2_9BACT
protein-(glutamine-N5) methyltransferase, release factor-specific
L2_047_000M1_scaffold_920_5
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3308..3820
DNA (513bp) protein (171aa)
Regulatory protein RecX n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILI1_9BACT
hypothetical protein
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_920_6
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3805..5535
DNA (1731bp) protein (577aa)
Membrane proteins related to metalloendopeptidases n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILI0_9BACT
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:CBK63792.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Membrane proteins related to metalloendopeptidases
L2_047_000M1_scaffold_920_7
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5594..5977
DNA (384bp) protein (128aa)
FOG: CheY-like receiver n=2 Tax=Alistipes RepID=D4ILH9_9BACT
FOG: CheY-like receiver
FOG: CheY-like receiver {ECO:0000313|EMBL:CCZ95948.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_920_8
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


6401..6949
DNA (549bp) protein (183aa)
30S ribosomal protein S16 n=2 Tax=Alistipes RepID=R5WTZ4_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
30S ribosomal protein S16
L2_047_000M1_scaffold_920_9
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7065..7628
DNA (564bp) protein (188aa)
Ribosome maturation factor RimM n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILH7_9BACT
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_920_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7631..8830
DNA (1200bp) protein (400aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILH6_9BACT
L2_047_000M1_scaffold_920_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8886..9347
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILH5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63787.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_920_12
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9803..10042
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5VYF4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ95943.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_920_13
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10055..10873
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5WTY9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ95942.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_920_14
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11039..13768
DNA (2730bp) protein (910aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CBK63784.1}; EC=2.7.9.1 {ECO:0000313|EMBL:CBK63784.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Pyruvate phosphate dikinase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILH2_9BACT
L2_047_000M1_scaffold_920_15
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13949..14410
DNA (462bp) protein (154aa)
Conserved domain protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5VZR0_9BACT
Conserved domain protein {ECO:0000313|EMBL:CCZ95940.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L2_047_000M1_scaffold_920_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14670..15191)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5W727_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ95939.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_920_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15184..15486)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5VYE8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63783.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_920_18
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15488..16033)
DNA (546bp) protein (182aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Peptide deformylase n=2 Tax=Alistipes RepID=D4ILH0_9BACT
L2_047_000M1_scaffold_920_19
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16167..16586)
DNA (420bp) protein (140aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Putative Holliday junction resolvase n=1 Tax=Alistipes sp. CAG:53 RepID=R5WJE7_9BACT
RNAse H-fold protein YqgF
L2_047_000M1_scaffold_920_20
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(16720..18264)
DNA (1545bp) protein (515aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILG9_9BACT
L2_047_000M1_scaffold_920_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18627..19874
DNA (1248bp) protein (416aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILG8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63780.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_920_22
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19944..20582)
DNA (639bp) protein (213aa)
DNA repair protein radc n=1 Tax=Alistipes sp. CAG:53 RepID=R5VYE2_9BACT
DNA repair protein radc {ECO:0000313|EMBL:CCZ95933.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
DNA repair protein radc
L2_047_000M1_scaffold_920_23
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20737..21531)
DNA (795bp) protein (265aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Alistipes sp. CAG:53 RepID=R5WTX3_9BACT
L2_047_000M1_scaffold_920_24
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21551..22798)
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447, ECO:0000313|EMBL:CBK63778.1}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447, ECO:0000313|EMBL:CBK63778.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Alistipes RepID=D4ILG6_9BACT
L2_047_000M1_scaffold_920_25
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22842..23078)
DNA (237bp) protein (79aa)
Acyl carrier protein n=2 Tax=Alistipes RepID=D4ILG5_9BACT
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_920_26
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23217..23918
DNA (702bp) protein (234aa)
Peptidase E (EC:3.4.13.21)
Peptidase E n=1 Tax=Alistipes sp. CAG:53 RepID=R5W716_9BACT
Peptidase E {ECO:0000313|EMBL:CCZ95929.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_920_27
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23935..24777
DNA (843bp) protein (281aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:CBK63775.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CBK63775.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Prephenate dehydrogenase n=2 Tax=Alistipes RepID=D4ILG3_9BACT
L2_047_000M1_scaffold_920_28
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24777..25142
DNA (366bp) protein (122aa)
UPF0102 protein AL1_13060 n=2 Tax=Alistipes RepID=D4ILG2_9BACT
Predicted endonuclease distantly related to archaeal Holliday junction resolvase
UPF0102 protein AL1_13060 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_920_29
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25255..26481
DNA (1227bp) protein (409aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Alistipes sp. CAG:53 RepID=R5WJD7_9BACT
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:CCZ95926.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
3-deoxy-D-manno-octulosonic-acid transferase
L2_047_000M1_scaffold_920_30
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26832..28526)
DNA (1695bp) protein (565aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILG0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK63772.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein
Displaying items 1-30 of 45 in total

View Taxonomy