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L2_047_000M1_scaffold_976

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_976_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..599
DNA (597bp) protein (199aa)
IMP cyclohydrolase-like protein n=2 Tax=Roseburia RepID=C0FMT7_9FIRM
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:EEG96017.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_047_000M1_scaffold_976_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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650..1828
DNA (1179bp) protein (393aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) n=2 Tax=root RepID=R5I0G0_9FIRM
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) {ECO:0000313|EMBL:CCY30462.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L2_047_000M1_scaffold_976_3
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1864..2685
DNA (822bp) protein (274aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Purine nucleoside phosphorylase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMU0_9FIRM
purine nucleoside phosphorylase
L2_047_000M1_scaffold_976_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2692..3969)
DNA (1278bp) protein (426aa)
Cytidyltransferase-related domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMU1_9FIRM
UPF0348 protein ROSEINA2194_00044 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Predicted nucleotidyltransferase
L2_047_000M1_scaffold_976_5
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4304..5497
DNA (1194bp) protein (398aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
acetate kinase A/propionate kinase 2 (EC:2.7.2.1)
Acetate kinase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMS1_9FIRM
L2_047_000M1_scaffold_976_6
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5697..6221
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30459.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative Zn-finger-like protein
L2_047_000M1_scaffold_976_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6226..6405
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=6 Tax=Roseburia RepID=D4KMZ5_9FIRM
ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_047_000M1_scaffold_976_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6563..7216
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30457.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_976_9
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7340..8368
DNA (1029bp) protein (343aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Phosphate acyltransferase n=2 Tax=Roseburia RepID=C0FMS7_9FIRM
phosphate:acyl-[acyl carrier protein] acyltransferase
L2_047_000M1_scaffold_976_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8371..8604
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HL44_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
acpP; acyl carrier protein
L2_047_000M1_scaffold_976_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8756..9448
DNA (693bp) protein (231aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=2 Tax=Roseburia RepID=C0FMS9_9FIRM
L2_047_000M1_scaffold_976_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9470..13030
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=2 Tax=root RepID=R5HLF0_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
chromosome segregation protein SMC
L2_047_000M1_scaffold_976_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13078..14031
DNA (954bp) protein (318aa)
Signal recognition particle receptor FtsY n=2 Tax=Roseburia RepID=R5I0E6_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
signal recognition particle-docking protein FtsY
L2_047_000M1_scaffold_976_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14091..15302
DNA (1212bp) protein (404aa)
threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase n=2 Tax=Roseburia RepID=C0FMU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30451.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L2_047_000M1_scaffold_976_15
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15393..15917
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HL38_9FIRM
L2_047_000M1_scaffold_976_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16002..17360
DNA (1359bp) protein (453aa)
Putative permease n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMU6_9FIRM
Putative permease {ECO:0000313|EMBL:EEG96034.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
MFS transporter xanthine/uracil permease
L2_047_000M1_scaffold_976_17
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17376..17528
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FMU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30448.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L2_047_000M1_scaffold_976_18
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17662..18006
DNA (345bp) protein (115aa)
UPF0122 protein ROSEINA2194_00059 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMU9_9FIRM
UPF0122 protein ROSEINA2194_00059 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_047_000M1_scaffold_976_19
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18008..19366
DNA (1359bp) protein (453aa)
Signal recognition particle protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMV0_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
signal recognition particle protein
L2_047_000M1_scaffold_976_20
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19402..19647
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=2 Tax=Roseburia RepID=C0FMU7_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
rpsP; 30S ribosomal protein S16
L2_047_000M1_scaffold_976_21
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19666..19896
DNA (231bp) protein (77aa)
UPF0109 protein ROSEINA2194_00062 n=2 Tax=Roseburia RepID=C0FMW8_9FIRM
UPF0109 protein ROSEINA2194_00062 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_047_000M1_scaffold_976_22
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19984..20505
DNA (522bp) protein (174aa)
Ribosome maturation factor RimM n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMW9_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
16S rRNA processing protein RimM
L2_047_000M1_scaffold_976_23
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20579..21304
DNA (726bp) protein (242aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0D3_9FIRM
L2_047_000M1_scaffold_976_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21327..21611
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG96042.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_047_000M1_scaffold_976_25
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21735..21986
DNA (252bp) protein (84aa)
50S ribosomal protein L19 n=2 Tax=Roseburia RepID=C0FMX8_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
rplS; 50S ribosomal protein L19
L2_047_000M1_scaffold_976_26
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22257..22934
DNA (678bp) protein (226aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMY0_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEG96045.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_047_000M1_scaffold_976_27
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23044..24036
DNA (993bp) protein (331aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMY1_9FIRM
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EEG96046.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
cell envelope-related function transcriptional attenuator common domain
L2_047_000M1_scaffold_976_28
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24033..24881
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30439.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
sortase, SrtB family
L2_047_000M1_scaffold_976_29
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25004..25585
DNA (582bp) protein (194aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HLD8_9FIRM
signal peptidase I
L2_047_000M1_scaffold_976_30
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25604..26458
DNA (855bp) protein (285aa)
Ribosome biogenesis GTPase A n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMY4_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ribosome biogenesis GTP-binding protein YlqF
Displaying items 1-30 of 40 in total

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