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L2_047_000M1_scaffold_982

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_982_1
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1009
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30556.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
transcriptional regulator, LacI family
L2_047_000M1_scaffold_982_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1057..2463
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30555.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_982_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2643..3557
DNA (915bp) protein (305aa)
ABC transporter, permease protein n=2 Tax=Roseburia RepID=C0FUS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30554.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_047_000M1_scaffold_982_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3584..4444
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30553.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_047_000M1_scaffold_982_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4693..4830
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30552.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_982_6
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4949..5392
DNA (444bp) protein (148aa)
CheW-like protein n=2 Tax=Roseburia RepID=C0FUR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30551.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Chemotaxis signal transduction protein
L2_047_000M1_scaffold_982_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5646..8948
DNA (3303bp) protein (1101aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30550.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Cation/multidrug efflux pump
L2_047_000M1_scaffold_982_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8908..9732
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30550.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Cation/multidrug efflux pump
L2_047_000M1_scaffold_982_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9732..10361
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HR09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30549.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_982_10
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11110..13755
DNA (2646bp) protein (882aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUR4_9FIRM
L2_047_000M1_scaffold_982_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13955..15343
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93691.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_047_000M1_scaffold_982_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15547..15729
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FUR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30546.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_982_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15776..17158
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30545.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_982_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17314..17622
DNA (309bp) protein (103aa)
Anti-sigma factor antagonist n=2 Tax=Roseburia RepID=C0FUQ9_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
anti-anti-sigma factor
L2_047_000M1_scaffold_982_15
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17644..17793
DNA (150bp) protein (50aa)
Anti-sigma F factor n=2 Tax=Roseburia RepID=C0FUQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30543.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L2_047_000M1_scaffold_982_16
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17919..18653
DNA (735bp) protein (245aa)
RNA polymerase sigma factor n=2 Tax=Roseburia RepID=C0FUQ7_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
FliA/WhiG family RNA polymerase sigma factor
L2_047_000M1_scaffold_982_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18784..20253
DNA (1470bp) protein (490aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUQ6_9FIRM
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:EEG93685.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Methyl-accepting chemotaxis protein
L2_047_000M1_scaffold_982_18
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20258..21049
DNA (792bp) protein (264aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUQ5_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EEG93684.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L2_047_000M1_scaffold_982_19
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21315..23897
DNA (2583bp) protein (861aa)
ATP-dependent chaperone protein ClpB n=2 Tax=Roseburia RepID=C0FUQ4_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ATP-dependent chaperone ClpB
L2_047_000M1_scaffold_982_20
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24008..24862)
DNA (855bp) protein (285aa)
Phospholipase, patatin family n=2 Tax=Roseburia RepID=C0FUQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30538.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_982_21
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25114..26211
DNA (1098bp) protein (366aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:EEG93681.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EEG93681.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
tryptophanyl-tRNA synthetase II (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUQ2_9FIRM
L2_047_000M1_scaffold_982_22
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26223..29735
DNA (3513bp) protein (1171aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUQ1_9FIRM
L2_047_000M1_scaffold_982_23
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29832..30806
DNA (975bp) protein (325aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Roseburia RepID=C0FUQ0_9FIRM
L2_047_000M1_scaffold_982_24
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30873..31727
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30534.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
RNA methyltransferase, TrmH family, group 3
L2_047_000M1_scaffold_982_25
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31724..31987
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30533.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_982_26
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32076..32597
DNA (522bp) protein (174aa)
HTH domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUP7_9FIRM
HTH domain protein {ECO:0000313|EMBL:EEG93676.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Predicted small molecule binding protein (contains 3H domain)
L2_047_000M1_scaffold_982_27
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32736..33395
DNA (660bp) protein (220aa)
RelA/SpoT domain protein n=2 Tax=Roseburia RepID=C0FUP6_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:EEG93675.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_047_000M1_scaffold_982_28
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33385..35325
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30530.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
signaling protein
L2_047_000M1_scaffold_982_29
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35338..37245
DNA (1908bp) protein (636aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUP3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG93672.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ABC transporter-like protein
L2_047_000M1_scaffold_982_30
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37260..37703)
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FUP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93671.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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