ggKbase home page

L2_047_000M1_scaffold_1003

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1003_1
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

222..893
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RR03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35297.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
sortase
L2_047_000M1_scaffold_1003_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

874..1548
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RKG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35296.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_000M1_scaffold_1003_3
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1549..2109
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6YLL3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD32329.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
GNAT family acetyltransferase
L2_047_000M1_scaffold_1003_4
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2150..2569
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JR04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33602.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L2_047_000M1_scaffold_1003_5
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

2580..3251
DNA (672bp) protein (224aa)
Nucleotidyltransferase domain protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GYT8_9FIRM
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:CDB30613.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
nucleotidyltransferase family protein
L2_047_000M1_scaffold_1003_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3253..3579
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CRM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY31966.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L2_047_000M1_scaffold_1003_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3638..4096
DNA (459bp) protein (153aa)
Acetyltransferase, GNAT family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTX5_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHM43283.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_047_000M1_scaffold_1003_8

Not on your lists

4139..5110
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RMG8_9ZZZZ
Protein of unknown function./Domain of unknown function (DUF1835).
Uncharacterized protein {ECO:0000313|EMBL:EKC44729.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_047_000M1_scaffold_1003_9
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5128..5583
DNA (456bp) protein (152aa)
Flavodoxin n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQJ8_FILAD
flavodoxin
Flavodoxin {ECO:0000313|EMBL:EFE29051.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
L2_047_000M1_scaffold_1003_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5627..7150
DNA (1524bp) protein (508aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31514.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
UMUC domain-containing protein DNA-repair protein
L2_047_000M1_scaffold_1003_11
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7147..7569
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D0F0_DESAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM39274.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
L2_047_000M1_scaffold_1003_12
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7569..7862
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BYP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA69283.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L2_047_000M1_scaffold_1003_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7952..8590
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ACS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37186.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L2_047_000M1_scaffold_1003_14
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8657..9364
DNA (708bp) protein (236aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYI8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM98487.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC-type multidrug transport system, ATPase component
L2_047_000M1_scaffold_1003_15
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

9357..10928
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RR45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35332.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_000M1_scaffold_1003_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11271..11573)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY33804.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L2_047_000M1_scaffold_1003_17
Streptococcus intermedius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11583..11789)
DNA (207bp) protein (69aa)
XRE family transcriptional regulator n=1 Tax=Allobaculum stercoricanis RepID=UPI0003653BA4
Helix-turn-helix family protein {ECO:0000313|EMBL:EKU18020.1}; TaxID=1248420 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus intermedius BA1.;"
Predicted transcriptional regulators
L2_047_000M1_scaffold_1003_18
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11786..12115)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7APP0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58514.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L2_047_000M1_scaffold_1003_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12574..13452)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGL7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ60565.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_047_000M1_scaffold_1003_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13546..14421)
DNA (876bp) protein (292aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=F4XGL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33240.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L2_047_000M1_scaffold_1003_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14439..15152)
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QN18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64295.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_047_000M1_scaffold_1003_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15218..15946)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11913.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_047_000M1_scaffold_1003_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15971..16288)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11912.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Barstar (barnase inhibitor).
L2_047_000M1_scaffold_1003_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16304..16663)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A1 RepID=N9ZJP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99281.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L2_047_000M1_scaffold_1003_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16682..17194)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00502.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_047_000M1_scaffold_1003_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17269..17754)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B7X8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68320.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_047_000M1_scaffold_1003_27
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17785..18357)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I135_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO30918.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_047_000M1_scaffold_1003_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18422..19171)
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0PI45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31055.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_047_000M1_scaffold_1003_29
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19208..19597)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E2SQL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP60217.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
L2_047_000M1_scaffold_1003_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19636..20757)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AR74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68324.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Displaying items 1-30 of 33 in total

View Taxonomy