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L2_047_000M1_scaffold_1033

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1033_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..267
DNA (267bp) protein (89aa)
Preprotein translocase, YajC subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6C3_9FIRM
preprotein translocase, YajC subunit
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:CBL03132.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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334..732
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SF99_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL03133.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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775..1521
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6C5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL03134.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1596..2999
DNA (1404bp) protein (468aa)
DNA repair protein radA n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6C6_9FIRM
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3015..4211
DNA (1197bp) protein (399aa)
Tyrosine recombinase XerC n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6C7_9FIRM
Site-specific recombinase XerD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4825..5688)
DNA (864bp) protein (288aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDP19908.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDP19908.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF92_9FIRM
putative amidase, containing N-acetylmuramoyl-L-alanine amidase domain
L2_047_000M1_scaffold_1033_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5798..8212)
DNA (2415bp) protein (805aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Endonuclease MutS2 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6C8_9FIRM
MutS2 family protein
L2_047_000M1_scaffold_1033_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8228..8977)
DNA (750bp) protein (250aa)
DNA repair protein RecO n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6C9_9FIRM
DNA replication and repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_9
unknown

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comp(8928..9092)
DNA (165bp) protein (55aa)

This feature has no annotations

L2_047_000M1_scaffold_1033_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9196..10131)
DNA (936bp) protein (312aa)
GTPase Era n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF88_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
era; GTPase Era
L2_047_000M1_scaffold_1033_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10167..10658)
DNA (492bp) protein (164aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Endoribonuclease YbeY n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6D0_9FIRM
conserved hypothetical protein TIGR00043
L2_047_000M1_scaffold_1033_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10682..11677)
DNA (996bp) protein (332aa)
PhoH family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF85_9FIRM
PhoH family protein {ECO:0000313|EMBL:EDP19903.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L2_047_000M1_scaffold_1033_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11930..12247
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6D1_9FIRM
transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CBL03140.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12244..12747
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6D2_9FIRM
Protein of unknown function (DUF2812).
Uncharacterized protein {ECO:0000313|EMBL:CBL03141.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12908..13102
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6D3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL03142.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13176..13991)
DNA (816bp) protein (272aa)
Selenium-dependent molybdenum hydroxylase system protein, YqeB family n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6D4_9FIRM
selenium-dependent molybdenum hydroxylase system protein, YqeB family
Selenium-dependent molybdenum hydroxylase system protein, YqeB family {ECO:0000313|EMBL:CBL03143.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13988..15043)
DNA (1056bp) protein (352aa)
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6D5_9FIRM
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family {ECO:0000313|EMBL:CBL03144.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15063..15293)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6D6_9FIRM
Protein of unknown function (DUF3343).
Uncharacterized protein {ECO:0000313|EMBL:CBL03145.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15284..16432)
DNA (1149bp) protein (383aa)
Cysteine desulfurase family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF73_9FIRM
Cysteine desulfurase family protein {ECO:0000313|EMBL:EDP19894.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
cysteine desulfurase family protein
L2_047_000M1_scaffold_1033_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16429..17043)
DNA (615bp) protein (205aa)
Selenium metabolism protein YedF n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF72_9FIRM
Selenium metabolism protein YedF {ECO:0000313|EMBL:EDP19893.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
selenium metabolism protein YedF
L2_047_000M1_scaffold_1033_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17058..18095)
DNA (1038bp) protein (346aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF70_9FIRM
L2_047_000M1_scaffold_1033_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18092..18793)
DNA (702bp) protein (234aa)
Probable selenium-dependent hydroxylase accessory protein YqeC n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6D9_9FIRM
probable selenium-dependent hydroxylase accessory protein YqeC
Probable selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:CBL03148.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18800..21058)
DNA (2259bp) protein (753aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF68_9FIRM
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein {ECO:0000313|EMBL:EDP19890.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000M1_scaffold_1033_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21055..21525)
DNA (471bp) protein (157aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs (EC:1.2.99.2)
2Fe-2S iron-sulfur cluster-binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF67_9FIRM
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:EDP19889.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000M1_scaffold_1033_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21526..22329)
DNA (804bp) protein (268aa)
FAD binding domain in molybdopterin dehydrogenase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF66_9FIRM
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:EDP19888.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
L2_047_000M1_scaffold_1033_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22433..23092
DNA (660bp) protein (220aa)
Uncharacterized MobA-related protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6E2_9FIRM
Uncharacterized MobA-related protein
Uncharacterized MobA-related protein {ECO:0000313|EMBL:CBL03151.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_1033_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23096..24493)
DNA (1398bp) protein (466aa)
Putative permease n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF63_9FIRM
Putative permease {ECO:0000313|EMBL:EDP19886.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
uracil-xanthine permease
L2_047_000M1_scaffold_1033_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24780..25616)
DNA (837bp) protein (279aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBL03153.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBL03153.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6E4_9FIRM
L2_047_000M1_scaffold_1033_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25639..25944)
DNA (306bp) protein (102aa)
Branched-chain amino acid transport protein (AzlD) n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF60_9FIRM
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:EDP19883.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Branched-chain amino acid transport protein (AzlD).
L2_047_000M1_scaffold_1033_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25934..26710)
DNA (777bp) protein (259aa)
AzlC protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF58_9FIRM
AzlC protein {ECO:0000313|EMBL:EDP19882.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
Displaying 30 items

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