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L2_047_000M1_scaffold_1178

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1178_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..332)
DNA (330bp) protein (110aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAL1_9FIRM
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:CCY33987.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ATP:cob(I)alamin adenosyltransferase
L2_047_000M1_scaffold_1178_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(632..1783)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33988.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Alcohol dehydrogenase, class IV
L2_047_000M1_scaffold_1178_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1831..2604)
DNA (774bp) protein (258aa)
Transcriptional regulators of sugar metabolism n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I0R4_9FIRM
Transcriptional regulators of sugar metabolism {ECO:0000313|EMBL:CCY33989.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Transcriptional regulators of sugar metabolism
L2_047_000M1_scaffold_1178_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2647..3195)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77000.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_047_000M1_scaffold_1178_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3212..4540)
DNA (1329bp) protein (443aa)
respiratory-chain NADH dehydrogenase domain-containing protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031A8E33
Uncharacterized protein {ECO:0000313|EMBL:CDD78937.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC
L2_047_000M1_scaffold_1178_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4545..4811)
DNA (267bp) protein (89aa)
ethanolamine utilization protein EutN n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F66F08
Uncharacterized protein {ECO:0000313|EMBL:EES77002.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_047_000M1_scaffold_1178_7
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4916..5560)
DNA (645bp) protein (215aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Phosphate propanoyltransferase n=1 Tax=Blautia sp. CAG:257 RepID=R5X909_9FIRM
Propanediol utilization protein
L2_047_000M1_scaffold_1178_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5688..6170)
DNA (483bp) protein (161aa)
Propanediol utilization protein PduA n=2 Tax=Ruminococcus RepID=C6JCV5_9FIRM
Microcompartments protein {ECO:0000313|EMBL:CDD78934.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_047_000M1_scaffold_1178_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6170..6472)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78933.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_047_000M1_scaffold_1178_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6494..6769)
DNA (276bp) protein (92aa)
Propanediol utilization protein PduA n=2 Tax=Ruminococcus RepID=C6JCV7_9FIRM
Propanediol utilization protein PduA {ECO:0000313|EMBL:EES77006.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_047_000M1_scaffold_1178_11
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6898..7212)
DNA (315bp) protein (105aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein n=3 Tax=Clostridiales RepID=D4LJS6_9FIRM
Carbon dioxide concentrating mechanism/carboxysome shell protein
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CBL20087.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_047_000M1_scaffold_1178_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7236..8474)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77008.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L2_047_000M1_scaffold_1178_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8492..9880)
DNA (1389bp) protein (463aa)
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:EDM88971.1}; EC=1.2.1.- {ECO:0000313|EMBL:EDM88971.1};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZM77_9FIRM
NAD-dependent aldehyde dehydrogenases
L2_047_000M1_scaffold_1178_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9954..10820)
DNA (867bp) protein (289aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases (EC:4.1.2.17)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases {ECO:0000313|EMBL:CBL23216.1}; EC=4.1.2.17 {ECO:0000313|EMBL:CBL23216.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LR08_9FIRM
L2_047_000M1_scaffold_1178_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11067..11540)
DNA (474bp) protein (158aa)
Ethanolamine utilization protein EutP n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX70_9FIRM
Ethanolamine utilization protein EutP {ECO:0000313|EMBL:CCY34335.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
pduV3; ethanolamine/propanediol utilization protein PduV3
L2_047_000M1_scaffold_1178_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11547..11924)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I1Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34334.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
microcompartment protein
L2_047_000M1_scaffold_1178_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12204..12917
DNA (714bp) protein (238aa)
Histidinol phosphatase and related hydrolases of the PHP family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWX9_9FIRM
Histidinol phosphatase and related hydrolases of the PHP family {ECO:0000313|EMBL:CCY34333.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Histidinol phosphatase and related hydrolases of the PHP family
L2_047_000M1_scaffold_1178_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13041..13349)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IBJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34332.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Uncharacterized protein containing a Zn-finger-like domain
L2_047_000M1_scaffold_1178_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14089..15135)
DNA (1047bp) protein (349aa)
Lipolytic protein G-D-S-L family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I804_9FIRM
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:CCY33082.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
GDSL family lipase
L2_047_000M1_scaffold_1178_20
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15308..16663)
DNA (1356bp) protein (452aa)
NlpC/P60 family protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSZ2_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:CCY32888.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L2_047_000M1_scaffold_1178_21
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17036..18313)
DNA (1278bp) protein (426aa)
Putative cell wall binding repeat n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HXK3_9FIRM
Putative cell wall binding repeat {ECO:0000313|EMBL:CCY32889.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Putative cell wall binding repeat.
L2_047_000M1_scaffold_1178_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18360..18554)
DNA (195bp) protein (65aa)
Putative cell wall binding repeat n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HXK3_9FIRM
Putative cell wall binding repeat {ECO:0000313|EMBL:CCY32889.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_047_000M1_scaffold_1178_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18864..19850)
DNA (987bp) protein (329aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HT22_9FIRM
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:CCY32890.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L2_047_000M1_scaffold_1178_24
unknown

Not on your lists

comp(19869..20030)
DNA (162bp) protein (54aa)

This feature has no annotations

L2_047_000M1_scaffold_1178_25
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20133..20792)
DNA (660bp) protein (220aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Blautia sp. CAG:257 RepID=R5XME6_9FIRM
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:CDA05502.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L2_047_000M1_scaffold_1178_26
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20776..21630)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7Y7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32891.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_047_000M1_scaffold_1178_27
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21632..22045)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32892.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_047_000M1_scaffold_1178_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22187..23389)
DNA (1203bp) protein (401aa)
SAM-dependent methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32893.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L2_047_000M1_scaffold_1178_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23706..24317)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HXK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32894.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_047_000M1_scaffold_1178_30
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24665..26218)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HT28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32895.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted secreted protein
Displaying items 1-30 of 36 in total

View Taxonomy