ggKbase home page

L2_047_000M1_scaffold_1279

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1279_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..317)
DNA (315bp) protein (105aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIQ6_9FIRM
exodeoxyribonuclease VII large subunit
L2_047_000M1_scaffold_1279_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(305..1246)
DNA (942bp) protein (314aa)
probableO-sialoglycoprotein endopeptidase (EC:3.4.24.57)
Metallohydrolase, glycoprotease/Kae1 family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIQ5_9FIRM
Metallohydrolase, glycoprotease/Kae1 family {ECO:0000313|EMBL:EFQ06954.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_047_000M1_scaffold_1279_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1243..1677)
DNA (435bp) protein (145aa)
N utilization substance protein B homolog n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIQ4_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transcription antitermination factor NusB
L2_047_000M1_scaffold_1279_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1752..2123)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06952.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_047_000M1_scaffold_1279_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2299..2925)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06950.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_047_000M1_scaffold_1279_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2958..3491)
DNA (534bp) protein (178aa)
Putative stage III sporulation protein AG n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIQ0_9FIRM
Putative stage III sporulation protein AG {ECO:0000313|EMBL:EFQ06949.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_047_000M1_scaffold_1279_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3488..3958)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06948.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_047_000M1_scaffold_1279_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3962..5044)
DNA (1083bp) protein (361aa)
Stage III sporulation protein AE (Spore_III_AE) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIP8_9FIRM
Stage III sporulation protein AE (Spore_III_AE) {ECO:0000313|EMBL:EFQ06947.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Stage III sporulation protein AE (spore_III_AE).
L2_047_000M1_scaffold_1279_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5041..5424)
DNA (384bp) protein (128aa)
Stage III sporulation protein AD (Spore_III_AD) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIP7_9FIRM
Stage III sporulation protein AD (Spore_III_AD) {ECO:0000313|EMBL:EFQ06946.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Stage III sporulation protein AC/AD protein family.
L2_047_000M1_scaffold_1279_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5421..5615)
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIP6_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:EFQ06945.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
stage III sporulation protein AC
L2_047_000M1_scaffold_1279_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5634..6098)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06944.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_047_000M1_scaffold_1279_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6095..6988)
DNA (894bp) protein (298aa)
Putative stage III sporulation protein AA n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIP4_9FIRM
Putative stage III sporulation protein AA {ECO:0000313|EMBL:EFQ06943.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_047_000M1_scaffold_1279_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7117..9108)
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIP3_9FIRM
L2_047_000M1_scaffold_1279_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9740..10315
DNA (576bp) protein (192aa)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EFQ06940.1}; EC=3.2.2.- {ECO:0000313|EMBL:EFQ06940.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
uracil-DNA glycosylase, family 4 (EC:2.7.7.7)
Uracil-DNA glycosylase, family 4 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIP1_9FIRM
L2_047_000M1_scaffold_1279_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10386..11471
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06939.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_047_000M1_scaffold_1279_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11444..13948
DNA (2505bp) protein (835aa)
DEAD2 domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIN9_9FIRM
DEAD2 domain protein {ECO:0000313|EMBL:EFQ06938.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Rad3-related DNA helicases
L2_047_000M1_scaffold_1279_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14015..14986)
DNA (972bp) protein (324aa)
Ketopantoate reductase PanE/ApbA n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIN8_9FIRM
Ketopantoate reductase PanE/ApbA {ECO:0000313|EMBL:EFQ06937.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Ketopantoate reductase
L2_047_000M1_scaffold_1279_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15022..15282)
DNA (261bp) protein (87aa)
Heavy metal-associated domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIN7_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:EFQ06936.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Copper chaperone
L2_047_000M1_scaffold_1279_19
unknown

Not on your lists

comp(15427..15528)
DNA (102bp) protein (34aa)

This feature has no annotations

L2_047_000M1_scaffold_1279_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15553..16068)
DNA (516bp) protein (172aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIN6_9FIRM
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EFQ06935.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_047_000M1_scaffold_1279_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16170..17423)
DNA (1254bp) protein (418aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIN5_9FIRM
L2_047_000M1_scaffold_1279_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17968..18249
DNA (282bp) protein (94aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIN4_9FIRM
L2_047_000M1_scaffold_1279_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18240..18875
DNA (636bp) protein (212aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:3.5.4.9 4.3.1.4)
Formiminotransferase-cyclodeaminase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIN3_9FIRM
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:EFQ06932.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_047_000M1_scaffold_1279_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18887..19741
DNA (855bp) protein (285aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIN2_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_047_000M1_scaffold_1279_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19849..20802)
DNA (954bp) protein (318aa)
Glycosyltransferase, group 4 family {ECO:0000313|EMBL:EFQ06930.1}; EC=2.7.8.- {ECO:0000313|EMBL:EFQ06930.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Glycosyltransferase, group 4 family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIN1_9FIRM
L2_047_000M1_scaffold_1279_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20974..22392
DNA (1419bp) protein (473aa)
MATE efflux family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIN0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFQ06929.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
putative efflux protein, MATE family
L2_047_000M1_scaffold_1279_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22519..23118)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIM9_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted membrane protein
L2_047_000M1_scaffold_1279_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23380..24462
DNA (1083bp) protein (361aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIM7_9FIRM
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EFQ06926.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Small-conductance mechanosensitive channel
L2_047_000M1_scaffold_1279_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24701..25726)
DNA (1026bp) protein (342aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:EFQ06925.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EFQ06925.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
phosphotransacetylase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIM6_9FIRM
L2_047_000M1_scaffold_1279_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26109..27035)
DNA (927bp) protein (309aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIM5_9FIRM
Displaying items 1-30 of 43 in total

View Taxonomy