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L2_047_000M1_scaffold_1333

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1333_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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475..1548
DNA (1074bp) protein (358aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
3-isopropylmalate dehydrogenase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0X8_9FIRM
L2_047_000M1_scaffold_1333_2
unknown

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1930..2412
DNA (483bp) protein (161aa)

This feature has no annotations

L2_047_000M1_scaffold_1333_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3089..4294
DNA (1206bp) protein (402aa)
L-threonine ammonia-lyase (EC:4.3.1.19)
L-threonine ammonia-lyase {ECO:0000313|EMBL:CBK99928.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CBK99928.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L-threonine ammonia-lyase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0X9_9FIRM
L2_047_000M1_scaffold_1333_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4348..4521)
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Y0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99929.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1333_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4543..4848)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Y1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99930.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1333_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5445..6755)
DNA (1311bp) protein (437aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphomethylpyrimidine synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Y2_9FIRM
hydroxymethylpyrimidine synthase
L2_047_000M1_scaffold_1333_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6783..7616)
DNA (834bp) protein (278aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CBK99932.1}; EC=2.7.4.7 {ECO:0000313|EMBL:CBK99932.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphomethylpyrimidine kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Y3_9FIRM
L2_047_000M1_scaffold_1333_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7706..8359)
DNA (654bp) protein (218aa)
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Thiamine-phosphate synthase n=2 Tax=root RepID=D4K0Y4_9FIRM
L2_047_000M1_scaffold_1333_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8346..9167)
DNA (822bp) protein (274aa)
hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Hydroxyethylthiazole kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Y5_9FIRM
L2_047_000M1_scaffold_1333_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9189..9704)
DNA (516bp) protein (172aa)
ThiW protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Y6_9FIRM
thiW protein
ThiW protein {ECO:0000313|EMBL:CBK99935.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1333_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10279..11565
DNA (1287bp) protein (429aa)
Putative virion core protein (Lumpy skin disease virus) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Y7_9FIRM
Putative virion core protein (lumpy skin disease virus)
Putative virion core protein (Lumpy skin disease virus) {ECO:0000313|EMBL:CBK99936.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1333_12
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11581..12666
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q0X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30363.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_047_000M1_scaffold_1333_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12684..13466
DNA (783bp) protein (261aa)
Beta-propeller domains of methanol dehydrogenase type n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Y9_9FIRM
Beta-propeller domains of methanol dehydrogenase type
Beta-propeller domains of methanol dehydrogenase type {ECO:0000313|EMBL:CBK99938.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1333_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13555..14319)
DNA (765bp) protein (255aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNP0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFQ05284.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_047_000M1_scaffold_1333_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14309..15073)
DNA (765bp) protein (255aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9T3_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEU95408.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L2_047_000M1_scaffold_1333_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15182..16024)
DNA (843bp) protein (281aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNN8_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ05282.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_047_000M1_scaffold_1333_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16155..16634)
DNA (480bp) protein (160aa)
Nitroreductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K106_9FIRM
Nitroreductase
Nitroreductase {ECO:0000313|EMBL:CBK99955.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1333_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16763..17227)
DNA (465bp) protein (155aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K108_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99957.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1333_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17224..18015)
DNA (792bp) protein (264aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K109_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99958.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1333_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18199..19278
DNA (1080bp) protein (360aa)
SpoIID/LytB domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K110_9FIRM
SpoIID/LytB domain
SpoIID/LytB domain {ECO:0000313|EMBL:CBK99959.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1333_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19428..21854
DNA (2427bp) protein (809aa)
Predicted glycosyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K111_9FIRM
Predicted glycosyltransferases
Predicted glycosyltransferases {ECO:0000313|EMBL:CBK99960.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1333_22
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22067..22858
DNA (792bp) protein (264aa)
Glycosyltransferase group 2 family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QCZ0_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDC30939.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted glycosyltransferases
L2_047_000M1_scaffold_1333_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23119..24006
DNA (888bp) protein (296aa)
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBK99961.1}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBK99961.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K112_9FIRM
L2_047_000M1_scaffold_1333_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24023..24940
DNA (918bp) protein (306aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBK99962.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBK99962.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K113_9FIRM
L2_047_000M1_scaffold_1333_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24962..26068
DNA (1107bp) protein (369aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBK99963.1}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBK99963.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K114_9FIRM
L2_047_000M1_scaffold_1333_26

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comp(26074..26421)
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:AHF24877.1}; TaxID=1393535 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig21.;"
L2_047_000M1_scaffold_1333_27
unknown

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comp(26436..27077)
DNA (642bp) protein (214aa)

This feature has no annotations

L2_047_000M1_scaffold_1333_28
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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27213..27533
DNA (321bp) protein (107aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AGU6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCX40142.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
Helix-turn-helix.
L2_047_000M1_scaffold_1333_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27587..28423)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H629_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96615.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
conserved hypothetical protein (putative transposase or invertase)
L2_047_000M1_scaffold_1333_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28558..29637)
DNA (1080bp) protein (360aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase {ECO:0000313|EMBL:CBK99939.1}; EC=2.7.1.11 {ECO:0000313|EMBL:CBK99939.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
6-phosphofructokinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0Z0_9FIRM
Displaying items 1-30 of 37 in total

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