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L2_047_000M1_scaffold_1355

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1355_1
unknown

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comp(2..103)
DNA (102bp) protein (34aa)

This feature has no annotations

L2_047_000M1_scaffold_1355_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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336..821
DNA (486bp) protein (162aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Putative rRNA large subunit m3Psi methyltransferase RlmH n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZM97_9FIRM
hypothetical protein
L2_047_000M1_scaffold_1355_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1499..2059
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4T7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98530.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2330..3751
DNA (1422bp) protein (474aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Glycine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1X4_9FIRM
L2_047_000M1_scaffold_1355_5
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3914..4012)
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q102_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30393.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_047_000M1_scaffold_1355_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4271..5512
DNA (1242bp) protein (414aa)
Thermophilic metalloprotease (M29) n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H699_9FIRM
Thermophilic metalloprotease (M29) {ECO:0000313|EMBL:EEU96594.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
aminopeptidase 2
L2_047_000M1_scaffold_1355_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5639..6124
DNA (486bp) protein (162aa)
Ribosome maturation factor RimP n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1X5_9FIRM
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6198..7319
DNA (1122bp) protein (374aa)
Transcription termination factor NusA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1X6_9FIRM
transcription termination factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7353..7658
DNA (306bp) protein (102aa)
Predicted nucleic-acid-binding protein implicated in transcription termination n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1X7_9FIRM
Predicted nucleic-acid-binding protein implicated in transcription termination
Predicted nucleic-acid-binding protein implicated in transcription termination {ECO:0000313|EMBL:CBL00276.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7642..8019
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1X8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00277.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8016..10463
DNA (2448bp) protein (816aa)
Translation initiation factor IF-2 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1X9_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
bacterial translation initiation factor 2 (bIF-2)
L2_047_000M1_scaffold_1355_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10729..11115
DNA (387bp) protein (129aa)
Ribosome-binding factor A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Y0_9FIRM
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11147..12130
DNA (984bp) protein (328aa)
Exopolyphosphatase-related proteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Y1_9FIRM
Exopolyphosphatase-related proteins
Exopolyphosphatase-related proteins {ECO:0000313|EMBL:CBL00280.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12130..13023
DNA (894bp) protein (298aa)
tRNA pseudouridine 55 synthase (EC:5.4.99.12)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
tRNA pseudouridine synthase B n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Y2_9FIRM
L2_047_000M1_scaffold_1355_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13030..13947
DNA (918bp) protein (306aa)
riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491, ECO:0000313|EMBL:CBL00282.1};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491, ECO:0000313|EMBL:CBL00282.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Riboflavin kinase/FMN adenylyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Y3_9FIRM
L2_047_000M1_scaffold_1355_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14024..15574)
DNA (1551bp) protein (517aa)
Carboxylesterase type B (EC:3.1.1.1)
Carboxylesterase type B {ECO:0000313|EMBL:CBL00283.1}; EC=3.1.1.1 {ECO:0000313|EMBL:CBL00283.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Carboxylesterase type B n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Y4_9FIRM
L2_047_000M1_scaffold_1355_17
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15802..15945
DNA (144bp) protein (48aa)
30S ribosomal protein S15 n=4 Tax=Faecalibacterium RepID=D4K1Y5_9FIRM
SSU ribosomal protein S15P
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_047_000M1_scaffold_1355_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16168..18312
DNA (2145bp) protein (715aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000313|EMBL:CBL00285.1}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000313|EMBL:CBL00285.1};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Y6_9FIRM
L2_047_000M1_scaffold_1355_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18833..19753
DNA (921bp) protein (307aa)
ABC-type metal ion transport system, periplasmic component/surface antigen n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Y7_9FIRM
ABC-type metal ion transport system, periplasmic component/surface antigen
ABC-type metal ion transport system, periplasmic component/surface antigen {ECO:0000313|EMBL:CBL00286.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_20
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19775..20788
DNA (1014bp) protein (338aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC transporter ATP-binding protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QHG5_9FIRM
ABC-type metal ion transport system, ATPase component
L2_047_000M1_scaffold_1355_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20785..21441
DNA (657bp) protein (219aa)
ABC-type metal ion transport system, permease component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Y8_9FIRM
ABC-type metal ion transport system, permease component
ABC-type metal ion transport system, permease component {ECO:0000313|EMBL:CBL00287.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21583..22857
DNA (1275bp) protein (425aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CBL00288.1}; EC=2.5.1.49 {ECO:0000313|EMBL:CBL00288.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
O-acetylhomoserine sulfhydrolase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Y9_9FIRM
L2_047_000M1_scaffold_1355_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22870..23808
DNA (939bp) protein (313aa)
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Homoserine O-succinyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z0_9FIRM
L2_047_000M1_scaffold_1355_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23866..24918
DNA (1053bp) protein (351aa)
L-aminopeptidase/D-esterase (EC:3.4.11.19)
L-aminopeptidase/D-esterase {ECO:0000313|EMBL:CBL00290.1}; EC=3.4.11.19 {ECO:0000313|EMBL:CBL00290.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L-aminopeptidase/D-esterase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z1_9FIRM
L2_047_000M1_scaffold_1355_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25332..25910)
DNA (579bp) protein (193aa)
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z2_9FIRM
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family {ECO:0000313|EMBL:CBL00291.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25907..26887)
DNA (981bp) protein (327aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z3_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL00292.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26902..27639)
DNA (738bp) protein (246aa)
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z4_9FIRM
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases {ECO:0000313|EMBL:CBL00293.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27752..28771
DNA (1020bp) protein (340aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z5_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components {ECO:0000313|EMBL:CBL00294.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1355_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28820..29731)
DNA (912bp) protein (304aa)
Branched-chain amino acid uptake carrier n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z6_9FIRM
branched-chain amino acid uptake carrier
Branched-chain amino acid uptake carrier {ECO:0000313|EMBL:CBL00295.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying 29 items

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