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L2_047_000M1_scaffold_1492

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1492_1
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(2..271)
DNA (270bp) protein (90aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMX9_9FIRM
L2_047_000M1_scaffold_1492_2
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(320..922)
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZS4_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsD; 30S ribosomal protein S4
L2_047_000M1_scaffold_1492_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(947..1351)
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S633_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsK; 30S ribosomal protein S11
L2_047_000M1_scaffold_1492_4
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(1368..1736)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYL7_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsM; 30S ribosomal protein S13
L2_047_000M1_scaffold_1492_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(1760..1873)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=3 Tax=Firmicutes RepID=R5D9M5_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rpmJ; 50S ribosomal protein L36
L2_047_000M1_scaffold_1492_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(1889..2092)
DNA (204bp) protein (68aa)
Translation initiation factor IF-1 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMY5_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
infA; translation initiation factor IF-1
L2_047_000M1_scaffold_1492_7
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(2089..2400)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46318.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L2_047_000M1_scaffold_1492_8
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(2411..3163)
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S640_9FIRM
L2_047_000M1_scaffold_1492_9
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(3174..3803)
DNA (630bp) protein (210aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYM2_9FIRM
L2_047_000M1_scaffold_1492_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(3817..5109)
DNA (1293bp) protein (431aa)
Protein translocase subunit SecY n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHW7_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
preprotein translocase subunit SecY
L2_047_000M1_scaffold_1492_11
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(5110..5550)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMY9_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplO; 50S ribosomal protein L15
L2_047_000M1_scaffold_1492_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(5565..5747)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZT4_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpmD; 50S ribosomal protein L30
L2_047_000M1_scaffold_1492_13
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(5761..6261)
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S645_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsE; 30S ribosomal protein S5
L2_047_000M1_scaffold_1492_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


comp(6279..6638)
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXH0_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rplR; 50S ribosomal protein L18
L2_047_000M1_scaffold_1492_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(6653..7198)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHX4_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplF; 50S ribosomal protein L6
L2_047_000M1_scaffold_1492_16
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(7214..7609)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMZ4_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsH; 30S ribosomal protein S8
L2_047_000M1_scaffold_1492_17
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(7902..8087)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZU2_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsZ; 30S ribosomal protein S14 type Z
L2_047_000M1_scaffold_1492_18
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(8105..8644)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S649_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplE; 50S ribosomal protein L5
L2_047_000M1_scaffold_1492_19
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(8665..8976)
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYN3_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplX; 50S ribosomal protein L24
L2_047_000M1_scaffold_1492_20
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(8992..9360)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHX9_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplN; 50S ribosomal protein L14
L2_047_000M1_scaffold_1492_21
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(9376..9639)
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SN01_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsQ; 30S ribosomal protein S17
L2_047_000M1_scaffold_1492_22
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(9641..9838)
DNA (198bp) protein (66aa)
50S ribosomal protein L29 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZU7_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpmC; 50S ribosomal protein L29
L2_047_000M1_scaffold_1492_23
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(9835..10269)
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S656_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplP; 50S ribosomal protein L16
L2_047_000M1_scaffold_1492_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(10269..11126)
DNA (858bp) protein (286aa)
30S ribosomal protein S3 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYN7_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsC; 30S ribosomal protein S3
L2_047_000M1_scaffold_1492_25
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(11144..11479)
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHY2_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplV; 50S ribosomal protein L22
L2_047_000M1_scaffold_1492_26
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(11497..11760)
DNA (264bp) protein (88aa)
30S ribosomal protein S19 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SN07_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsS; 30S ribosomal protein S19
L2_047_000M1_scaffold_1492_27
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(11776..12612)
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZV1_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplB; 50S ribosomal protein L2
L2_047_000M1_scaffold_1492_28
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(12628..12924)
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S663_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplW; 50S ribosomal protein L23
L2_047_000M1_scaffold_1492_29
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(12924..13547)
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYP2_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplD; 50S ribosomal protein L4
L2_047_000M1_scaffold_1492_30
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13567..14286)
DNA (720bp) protein (240aa)
50S ribosomal protein L3 n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TWE1_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
rplC; 50S ribosomal protein L3
Displaying 30 items

View Taxonomy