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L2_047_000M1_scaffold_1726

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1726_1
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..2014
DNA (2013bp) protein (671aa)
Glycosidases (EC:3.2.1.20)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NWQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC16523.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_1726_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2121..2984)
DNA (864bp) protein (288aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Methionine aminopeptidase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P7D3_9FIRM
L2_047_000M1_scaffold_1726_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3120..3698
DNA (579bp) protein (193aa)
FOG: FHA domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M070_9FIRM
FOG: FHA domain
FOG: FHA domain {ECO:0000313|EMBL:CBL27430.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_1726_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3845..4240
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M071_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27431.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_1726_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4293..4811
DNA (519bp) protein (173aa)
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109, ECO:0000313|EMBL:CBL27432.1}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109, ECO:0000313|EMBL:CBL27432.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Shikimate kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M072_9FIRM
L2_047_000M1_scaffold_1726_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4992..6284
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Clostridiales RepID=D4M073_9FIRM
L2_047_000M1_scaffold_1726_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6502..7971
DNA (1470bp) protein (490aa)
Bacterial capsule synthesis protein PGA_cap n=1 Tax=Ruminococcus torques L2-14 RepID=D4M074_9FIRM
Bacterial capsule synthesis protein PGA_cap.
Bacterial capsule synthesis protein PGA_cap {ECO:0000313|EMBL:CBL27434.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_1726_8
unknown

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7952..8059
DNA (108bp) protein (36aa)

This feature has no annotations

L2_047_000M1_scaffold_1726_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8232..9425
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZE5_9FIRM
L2_047_000M1_scaffold_1726_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9517..10575
DNA (1059bp) protein (353aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain n=2 Tax=Clostridiales RepID=D4M076_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L2_047_000M1_scaffold_1726_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10568..11260
DNA (693bp) protein (231aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=2 Tax=Clostridiales RepID=D4M077_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL27437.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_1726_12
unknown

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11287..11400
DNA (114bp) protein (38aa)

This feature has no annotations

L2_047_000M1_scaffold_1726_13
unknown

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11485..11586
DNA (102bp) protein (34aa)

This feature has no annotations

L2_047_000M1_scaffold_1726_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11543..12538
DNA (996bp) protein (332aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Biotin synthase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M079_9FIRM
L2_047_000M1_scaffold_1726_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12719..14125
DNA (1407bp) protein (469aa)
Trk-type K+ transport systems membrane components n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P7D9_9FIRM
Trk-type K+ transport systems membrane components {ECO:0000313|EMBL:CDC16534.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Trk-type K+ transport systems, membrane components
L2_047_000M1_scaffold_1726_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14195..14851
DNA (657bp) protein (219aa)
K+ transport systems, NAD-binding component n=2 Tax=Clostridiales RepID=D4M081_9FIRM
K+ transport systems, NAD-binding component
K+ transport systems NAD-binding component {ECO:0000313|EMBL:CDC16535.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_1726_17
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14855..15652
DNA (798bp) protein (266aa)
rRNA methylase putative group 3 n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PDD0_9FIRM
rRNA methylase putative group 3 {ECO:0000313|EMBL:CDC16536.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
rRNA methylase, putative, group 3
L2_047_000M1_scaffold_1726_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15836..16828
DNA (993bp) protein (331aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q3P3_9FIRM
L2_047_000M1_scaffold_1726_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17034..18026
DNA (993bp) protein (331aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
BirA biotin-[acetyl-CoA-carboxylase] ligase region n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NWR9_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_1726_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18149..18493
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M086_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27446.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_1726_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18649..20871)
DNA (2223bp) protein (741aa)
ATP-dependent protease La (EC:3.4.21.53)
ATP-dependent protease La n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZF1_9FIRM
ATP-dependent protease La {ECO:0000313|EMBL:CDC16540.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_1726_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20971..21585)
DNA (615bp) protein (205aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PDD4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDC16541.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Transcriptional regulator
L2_047_000M1_scaffold_1726_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21848..22216
DNA (369bp) protein (123aa)
SCP-2 sterol transfer family n=2 Tax=Clostridiales RepID=D4M089_9FIRM
SCP-2 sterol transfer family.
SCP-2 sterol transfer family {ECO:0000313|EMBL:CDC16542.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_1726_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22245..23210
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NWS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC16543.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Hydrolases of the alpha/beta superfamily
L2_047_000M1_scaffold_1726_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23207..24625
DNA (1419bp) protein (473aa)
Non-ribosomal peptide synthetase modules and related proteins n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P7E6_9FIRM
Non-ribosomal peptide synthetase modules and related proteins {ECO:0000313|EMBL:CDC16544.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Non-ribosomal peptide synthetase modules and related proteins
L2_047_000M1_scaffold_1726_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24688..24912
DNA (225bp) protein (75aa)
Acyl carrier protein n=2 Tax=Clostridiales RepID=D4M091_9FIRM
Acyl carrier protein
Acyl carrier protein {ECO:0000313|EMBL:CDC16545.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_1726_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24925..26385
DNA (1461bp) protein (487aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
Long-chain acyl-CoA synthetases (AMP-forming) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PDD8_9FIRM
Long-chain acyl-CoA synthetases (AMP-forming) {ECO:0000313|EMBL:CDC16546.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_047_000M1_scaffold_1726_28
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26567..27532
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
tRNA-dihydrouridine synthase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M093_9FIRM
tRNA-U20-dihydrouridine synthase
L2_047_000M1_scaffold_1726_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27802..27900
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M094_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27454.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_000M1_scaffold_1726_30
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27917..28399
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=2 Tax=Clostridiales RepID=D4M095_9FIRM
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Displaying items 1-30 of 32 in total

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