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L2_047_000M1_scaffold_1837

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1837_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZI3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99432.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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584..1585
DNA (1002bp) protein (334aa)
Zn-dependent dipeptidase, microsomal dipeptidase homolog (EC:3.4.13.19)
Zn-dependent dipeptidase, microsomal dipeptidase homolog {ECO:0000313|EMBL:CBK99677.1}; EC=3.4.13.19 {ECO:0000313|EMBL:CBK99677.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Zn-dependent dipeptidase, microsomal dipeptidase homolog n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K078_9FIRM
L2_047_000M1_scaffold_1837_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1687..2535
DNA (849bp) protein (283aa)
Beta-lactamase class A (EC:3.5.2.6)
Beta-lactamase class A {ECO:0000313|EMBL:CBK99678.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CBK99678.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Beta-lactamase class A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K079_9FIRM
L2_047_000M1_scaffold_1837_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2576..3346
DNA (771bp) protein (257aa)
Predicted permeases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K080_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBK99679.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3403..4260)
DNA (858bp) protein (286aa)
EDD domain protein, DegV family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K081_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBK99680.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4457..4906
DNA (450bp) protein (150aa)
CAAX amino terminal protease family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QDA7_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EEU97767.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
CAAX amino terminal protease family.
L2_047_000M1_scaffold_1837_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4903..5391
DNA (489bp) protein (163aa)
tRNA-adenosine deaminase (EC:3.5.4.-)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
tRNA-adenosine deaminase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K082_9FIRM
L2_047_000M1_scaffold_1837_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5652..6578
DNA (927bp) protein (309aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF76_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFQ08196.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
short-chain dehydrogenase/reductase SDR
L2_047_000M1_scaffold_1837_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6652..8037
DNA (1386bp) protein (462aa)
RNA polymerase sigma factor SigA n=2 Tax=root RepID=D4K083_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_10
unknown

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8826..9026
DNA (201bp) protein (67aa)

This feature has no annotations

L2_047_000M1_scaffold_1837_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9331..10989
DNA (1659bp) protein (553aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088, ECO:0000313|EMBL:CBK99706.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutaminyl-tRNA synthetase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0A7_9FIRM
L2_047_000M1_scaffold_1837_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11039..11434
DNA (396bp) protein (132aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0A8_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK99707.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11734..12813
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0A9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99708.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_14
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12797..14239
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q200_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29805.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_047_000M1_scaffold_1837_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14257..15804
DNA (1548bp) protein (516aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0B0_9FIRM
ATPase family associated with various cellular activities (AAA).
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CBK99709.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16089..17183)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0B1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99710.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17170..17661)
DNA (492bp) protein (164aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0B2_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBK99711.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17900..18472)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0B3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99712.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18474..19469)
DNA (996bp) protein (332aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLW1_9FIRM
L2_047_000M1_scaffold_1837_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19888..20367)
DNA (480bp) protein (160aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Deoxycytidylate deaminase {ECO:0000313|EMBL:CBK99715.1}; EC=3.5.4.12 {ECO:0000313|EMBL:CBK99715.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Deoxycytidylate deaminase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0B6_9FIRM
L2_047_000M1_scaffold_1837_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20704..22674
DNA (1971bp) protein (657aa)
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:CBK99717.1}; EC=3.6.5.3 {ECO:0000313|EMBL:CBK99717.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Translation elongation factor 2 (EF-2/EF-G) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0B8_9FIRM
L2_047_000M1_scaffold_1837_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22877..23362
DNA (486bp) protein (162aa)
Transcription elongation factor GreA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0B9_9FIRM
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_1837_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23382..24893
DNA (1512bp) protein (504aa)
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Lysine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0C0_9FIRM
L2_047_000M1_scaffold_1837_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25189..25581)
DNA (393bp) protein (131aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CBK99720.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CBK99720.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Protein-tyrosine-phosphatase n=3 Tax=Faecalibacterium prausnitzii RepID=D4K0C1_9FIRM
L2_047_000M1_scaffold_1837_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25578..25994)
DNA (417bp) protein (139aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZKQ2_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EFQ06227.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_047_000M1_scaffold_1837_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26015..26491)
DNA (477bp) protein (159aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.-)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAN1_9FIRM
L2_047_000M1_scaffold_1837_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26554..27615)
DNA (1062bp) protein (354aa)
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
Riboflavin biosynthesis protein RibBA n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAN2_9FIRM
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000M1_scaffold_1837_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27628..28269)
DNA (642bp) protein (214aa)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EDP20843.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EDP20843.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
riboflavin synthase, alpha subunit (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDB0_9FIRM
L2_047_000M1_scaffold_1837_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28233..29357)
DNA (1125bp) protein (375aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDA9_9FIRM
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Displaying 29 items

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