ggKbase home page

L2_047_000M1_scaffold_1061_7

Organism: L2_047_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 15
Location: comp(6212..6955)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 247.0
  • Bit_score: 504
  • Evalue 7.20e-140
tRNA pseudouridine synthase A n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUJ4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 247.0
  • Bit_score: 504
  • Evalue 5.10e-140
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 247.0
  • Bit_score: 425
  • Evalue 6.50e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia inulinivorans → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 744
ATGAAGCGAGTAAAACTGATCGTAGCCTATGATGGAACGAATTACTGCGGGTGGCAGATACAGCCGAACGGAATCACCATTGAGCAGGTACTAAATGAAAACCTGTCAAAGCTGCTGGGGGAAGAAATCACAGTGACCGGTGCAAGCCGGACGGACTCCGGGGTGCATTCCATGGGAAATGTAGCTATTTTCGATACGGAGACAAGAATGCCGGCAGATAAAATTTCATTTGCATTAAATCAGAGGCTGCCGGAGGATATTGTCGTGCAGGATTCGTGCGAAGTTCCGTCCGACTGGCATCCGAGATATCAGGTCAGCCGGAAAACATACGAGTACCGCATTTTAAACCGTACTTTCCGTATGCCGAACCGCAGACTGGACACTTATTTTTATCATCACAAACTGGATGTGGACAAAATGAAGCAGGCGGCATCGTATCTTGTGGGAGAGCATGATTTCAAGAGCTTTTGTGCAGTTGGGGCACAGGTCAAAACAACGACGCGCACGATTTATTCCTGTGAGGTGGAGAAAGACGGGAATGATATTGTTACCATTCGGGTGACCGGAAATGGATTTTTATACAATATGGTACGCATTATCGCAGGAACGCTGATCCGTGTCGGCGGCGGCGAGATGGCGCCGGATGAGATACCACAGATCCTTGGGAAGAAAGACCGCACAGCTGCCGGACCAACGGCTCCGGCGCATGGACTTACGATGATGGGGATTGAGTATGGAGAGTGA
PROTEIN sequence
Length: 248
MKRVKLIVAYDGTNYCGWQIQPNGITIEQVLNENLSKLLGEEITVTGASRTDSGVHSMGNVAIFDTETRMPADKISFALNQRLPEDIVVQDSCEVPSDWHPRYQVSRKTYEYRILNRTFRMPNRRLDTYFYHHKLDVDKMKQAASYLVGEHDFKSFCAVGAQVKTTTRTIYSCEVEKDGNDIVTIRVTGNGFLYNMVRIIAGTLIRVGGGEMAPDEIPQILGKKDRTAAGPTAPAHGLTMMGIEYGE*