ggKbase home page

L2_047_000M1_scaffold_764

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_764_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19..1185)
DNA (1167bp) protein (389aa)
restriction endonuclease (EC:3.1.21.3)
Type I restriction modification DNA specificity domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKV8_9CLOT
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EKY28634.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_047_000M1_scaffold_764_2
Spiroplasma chrysopicola, Spiroplasma, Entomoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(1185..1700)
DNA (516bp) protein (172aa)
hsdS; type I restriction enzyme, S subunit (EC:3.1.21.3)
Type I restriction enzyme, S subunit n=1 Tax=Streptococcus anginosus C238 RepID=T2A0S8_STRAP
Type I restriction enzyme, S subunit {ECO:0000313|EMBL:AGM24838.1}; TaxID=1276227 species="Bacteria; Tenericutes; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.;" source="Spiroplasma chrysopicola DF-1.;"
L2_047_000M1_scaffold_764_3
Treponema succinifaciens, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1702..3195)
DNA (1494bp) protein (498aa)
DNA methyltransferase n=1 Tax=Treponema bryantii RepID=UPI0003B795D5
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:AEB14014.1}; TaxID=869209 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091).;"
L2_047_000M1_scaffold_764_4
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3288..3824)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Succinimonas amylolytica RepID=UPI000380D80C
Uncharacterized protein {ECO:0000313|EMBL:EFF68823.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L2_047_000M1_scaffold_764_5
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3821..5539)
DNA (1719bp) protein (573aa)
type I restriction endonuclease subunit M n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B70A8A
Type I restriction-modification system methyltransferase subunit
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EDS21651.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L2_047_000M1_scaffold_764_6
Eggerthella sp. CAG:298, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5922..6368
DNA (447bp) protein (149aa)
ADP-ribosylglycohydrolase n=1 Tax=Eggerthella sp. CAG:298 RepID=R7B663_9ACTN
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:CDD60427.1}; TaxID=1262876 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:298.;"
Zn-ribbon protein
L2_047_000M1_scaffold_764_7
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6398..7312
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I256_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB40559.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
L2_047_000M1_scaffold_764_8
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7446..8033
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:631 RepID=R5V9X6_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_52_13
L2_047_000M1_scaffold_764_9
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8033..8914
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WS36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14126.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
conserved hypothetical protein (DUF1814)
L2_047_000M1_scaffold_764_10
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9204..10736)
DNA (1533bp) protein (511aa)
Radical SAM domain protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XU07_9PROT
Radical SAM domain protein {ECO:0000313|EMBL:CDA18205.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
Fe-S oxidoreductase
L2_047_000M1_scaffold_764_11
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10740..12020)
DNA (1281bp) protein (427aa)
dTDP-4-keto-6-deoxy-glucose 4-aminotransferase ScatV n=1 Tax=Acetobacter sp. CAG:267 RepID=R5Y0A3_9PROT
dTDP-4-keto-6-deoxy-glucose 4-aminotransferase ScatV {ECO:0000313|EMBL:CDA18204.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
gacV; dTDP-4-keto-6-deoxy-glucose-4-aminotransferase
L2_047_000M1_scaffold_764_12
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12001..13581)
DNA (1581bp) protein (527aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
Phosphorylase n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XSN6_9PROT
glycogen/starch/alpha-glucan phosphorylase
L2_047_000M1_scaffold_764_13
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13644..15257)
DNA (1614bp) protein (538aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Acetobacter sp. CAG:267 RepID=R5YNL5_9PROT
L2_047_000M1_scaffold_764_14
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15254..15979)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5YAD2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA18201.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
short chain dehydrogenase
L2_047_000M1_scaffold_764_15
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15963..17063)
DNA (1101bp) protein (367aa)
dTDP-glucose 4 6-dehydratase n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XU02_9PROT
dTDP-glucose 4 6-dehydratase {ECO:0000313|EMBL:CDA18200.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
dTDP-D-glucose 4,6-dehydratase
L2_047_000M1_scaffold_764_16
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17078..18277)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5Y099_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA18199.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
L2_047_000M1_scaffold_764_17
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18346..18552
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XSN3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA18198.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
L2_047_000M1_scaffold_764_18
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18874..19554)
DNA (681bp) protein (227aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Acetobacter sp. CAG:267 RepID=R5YNL1_9PROT
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CDA18197.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
L2_047_000M1_scaffold_764_19
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19780..21234
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5YAC6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA18196.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
L2_047_000M1_scaffold_764_20
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21332..22132)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XTZ8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA18195.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
chaperone protein DnaJ
L2_047_000M1_scaffold_764_21
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22265..23011
DNA (747bp) protein (249aa)
Putative exported protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5Y095_9PROT
Putative exported protein {ECO:0000313|EMBL:CDA18194.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
nitroreductase
L2_047_000M1_scaffold_764_22
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23210..23773)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5YNR9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA18262.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
chaperone protein DnaJ
L2_047_000M1_scaffold_764_23
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23852..24571)
DNA (720bp) protein (240aa)
Rubredoxin n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XSU4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA18263.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
flavin reductase-like FMN-binding protein
L2_047_000M1_scaffold_764_24
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24733..26046)
DNA (1314bp) protein (438aa)
Glycosyltransferase group 1 family protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5Y0G0_9PROT
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CDA18264.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
group 1 glycosyl transferase
L2_047_000M1_scaffold_764_25
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26048..27757)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae UCICRE 12 RepID=V3E4K8_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:ESL70245.1}; TaxID=1329856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae UCICRE 12.;"
hypothetical protein
L2_047_000M1_scaffold_764_26
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27747..27872)
DNA (126bp) protein (42aa)
Glycosyl transferase group 1 n=1 Tax=Acetobacter sp. CAG:267 RepID=R5YNA6_9PROT
Glycosyl transferase group 1 {ECO:0000313|EMBL:CDA18042.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
Displaying 26 items

View Taxonomy