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L2_047_000M1_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_247_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(389..859)
DNA (471bp) protein (157aa)
Uncharacterized conserved protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVA0_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK97019.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(879..1289)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV99_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97018.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1291..2592)
DNA (1302bp) protein (434aa)
phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444, ECO:0000313|EMBL:CBK97017.1};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Phenylacetate-CoA ligase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV98_9FIRM
L2_047_000M1_scaffold_247_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2609..4096)
DNA (1488bp) protein (496aa)
Beta-xylosidase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV97_9FIRM
Beta-xylosidase
Beta-xylosidase {ECO:0000313|EMBL:CBK97016.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4447..5349
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RQ05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47434.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L2_047_000M1_scaffold_247_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5440..7077)
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=3 Tax=Bacteria RepID=D4JV95_9FIRM
chaperonin GroL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L2_047_000M1_scaffold_247_7
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7100..7384)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=2 Tax=Eubacterium RepID=B0MKD5_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Co-chaperonin GroES (HSP10)
L2_047_000M1_scaffold_247_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7886..8509
DNA (624bp) protein (208aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=2 Tax=root RepID=D4JV94_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBK97013.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8572..10998)
DNA (2427bp) protein (809aa)
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV93_9FIRM
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC {ECO:0000313|EMBL:CBK97012.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11044..11517)
DNA (474bp) protein (158aa)
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:EDS01847.1}; EC=2.7.7.39 {ECO:0000313|EMBL:EDS01847.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39)
Glycerol-3-phosphate cytidylyltransferase n=3 Tax=root RepID=D4MHX3_9FIRM
L2_047_000M1_scaffold_247_11
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11474..12295)
DNA (822bp) protein (274aa)
LICD family protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6REN6_9FIRM
LICD family protein {ECO:0000313|EMBL:CDC47363.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
LPS biosynthesis protein
L2_047_000M1_scaffold_247_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12875..13615)
DNA (741bp) protein (247aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=3 Tax=root RepID=D4JV92_9FIRM
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:CBK97011.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13629..14429)
DNA (801bp) protein (267aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV91_9FIRM
ABC-type polysaccharide/polyol phosphate export systems, permease component
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14441..15463)
DNA (1023bp) protein (341aa)
Glycosyltransferases involved in cell wall biogenesis n=2 Tax=root RepID=D4JV90_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBK97009.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_15
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15463..16263)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RPS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47359.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Glycosyl transferase family 2.
L2_047_000M1_scaffold_247_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16718..18682)
DNA (1965bp) protein (655aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKC5_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDS01840.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
diguanylate cyclase with N-terminal HTH-type transcriptional regulator domain
L2_047_000M1_scaffold_247_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19007..21049
DNA (2043bp) protein (681aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Putative methionine--tRNA ligase n=3 Tax=root RepID=B0MKE5_9FIRM
Putative methionine--tRNA ligase {ECO:0000313|EMBL:EDS01838.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L2_047_000M1_scaffold_247_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21120..22199
DNA (1080bp) protein (360aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Eubacterium RepID=B0MKE4_9FIRM
L2_047_000M1_scaffold_247_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22717..23562)
DNA (846bp) protein (282aa)
Conserved repeat domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV88_9FIRM
conserved repeat domain
Conserved repeat domain {ECO:0000313|EMBL:CBK97007.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23665..24063)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV87_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97006.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24324..26627
DNA (2304bp) protein (768aa)
Stage II sporulation protein E (SpoIIE) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV86_9FIRM
Stage II sporulation protein E (SpoIIE).
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:CBK97005.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26794..27726
DNA (933bp) protein (311aa)
Permeases of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV85_9FIRM
Permeases of the drug/metabolite transporter (DMT) superfamily
Permeases of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:CBK97004.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28109..29206)
DNA (1098bp) protein (366aa)
Glycerol dehydrogenase {ECO:0000313|EMBL:EDS01830.1}; EC=1.1.1.6 {ECO:0000313|EMBL:EDS01830.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Glycerol dehydrogenase n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKE2_9FIRM
L2_047_000M1_scaffold_247_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30514..31590
DNA (1077bp) protein (359aa)
Beta-xylosidase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV82_9FIRM
Beta-xylosidase
Beta-xylosidase {ECO:0000313|EMBL:CBK97001.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31559..32719
DNA (1161bp) protein (387aa)
Beta-xylosidase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV82_9FIRM
Beta-xylosidase
Beta-xylosidase {ECO:0000313|EMBL:CBK97001.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32749..34557
DNA (1809bp) protein (603aa)
Beta-xylosidase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV81_9FIRM
Beta-xylosidase
Beta-xylosidase {ECO:0000313|EMBL:CBK97000.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34873..35055
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV79_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96998.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35085..35576
DNA (492bp) protein (164aa)
Phage integrase family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JV78_9FIRM
Phage integrase family.
Phage integrase family {ECO:0000313|EMBL:CBK96997.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_247_29
unknown

Not on your lists

comp(35424..35831)
DNA (408bp) protein (136aa)

This feature has no annotations

L2_047_000M1_scaffold_247_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35955..36548)
DNA (594bp) protein (198aa)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKZ0_9FIRM
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EDS01683.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
Displaying items 1-30 of 126 in total

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