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L2_047_000M1_scaffold_287

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_287_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(146..1150)
DNA (1005bp) protein (335aa)
Glycosyltransferase n=2 Tax=root RepID=D4JQW7_9FIRM
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBK95486.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1234..1995)
DNA (762bp) protein (254aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CBK95485.1}; EC=3.6.3.21 {ECO:0000313|EMBL:CBK95485.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) n=2 Tax=root RepID=D4JQW6_9FIRM
L2_047_000M1_scaffold_287_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2008..2751)
DNA (744bp) protein (248aa)
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQW5_9FIRM
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CBK95484.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3038..6679
DNA (3642bp) protein (1214aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RMB7_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDC44186.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
diguanylate cyclase (GGDEF) domain
L2_047_000M1_scaffold_287_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6733..7677)
DNA (945bp) protein (315aa)
Predicted transcriptional regulator n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQU7_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBK95466.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7748..8584)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQU6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95465.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8602..9669)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQU5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95464.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_8

Not on your lists

comp(9672..9944)
DNA (273bp) protein (91aa)
Mor transcription activator family n=2 Tax=root RepID=K1TVJ1_9ZZZZ
hypothetical protein
Mor transcription activator family {ECO:0000313|EMBL:EKC71654.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_047_000M1_scaffold_287_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10201..10785)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQU2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95461.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11011..11577
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQU1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95460.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11659..12267)
DNA (609bp) protein (203aa)
transaldolase, putative, TalC family (EC:2.2.1.2)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670, ECO:0000313|EMBL:CBK95459.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Transaldolase, putative, TalC family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQU0_9FIRM
L2_047_000M1_scaffold_287_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12338..13825)
DNA (1488bp) protein (496aa)
glycerol kinase (EC:2.7.1.30)
Glycerol kinase {ECO:0000313|EMBL:CBK95458.1}; EC=2.7.1.30 {ECO:0000313|EMBL:CBK95458.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glycerol kinase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQT9_9FIRM
L2_047_000M1_scaffold_287_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13861..14793)
DNA (933bp) protein (311aa)
transketolase subunit B (EC:2.2.1.1)
Transketolase subunit B {ECO:0000313|EMBL:CBK95457.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CBK95457.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Transketolase subunit B n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQT8_9FIRM
L2_047_000M1_scaffold_287_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14786..15607)
DNA (822bp) protein (274aa)
transketolase subunit A (EC:2.2.1.1)
Transketolase subunit A {ECO:0000313|EMBL:CBK95456.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CBK95456.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Transketolase subunit A n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQT7_9FIRM
L2_047_000M1_scaffold_287_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15672..17120)
DNA (1449bp) protein (483aa)
L-fucose isomerase and related proteins n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQT6_9FIRM
L-fucose isomerase and related proteins
L-fucose isomerase and related proteins {ECO:0000313|EMBL:CBK95455.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17134..18141)
DNA (1008bp) protein (336aa)
Transcriptional regulator, LacI family n=2 Tax=root RepID=D4JQT5_9FIRM
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CBK95454.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18243..19229)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQT4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95453.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_18
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19436..19624
DNA (189bp) protein (63aa)
Small, acid-soluble spore proteins, alpha/beta type n=5 Tax=root RepID=D4JQT2_9FIRM
Small, acid-soluble spore proteins, alpha/beta type.
Small acid-soluble spore proteins alpha/beta type {ECO:0000313|EMBL:CDC44214.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_287_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19896..21011
DNA (1116bp) protein (372aa)
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517, ECO:0000313|EMBL:CBL33538.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Branched-chain-amino-acid aminotransferase n=4 Tax=root RepID=D4JQT1_9FIRM
L2_047_000M1_scaffold_287_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21159..22535
DNA (1377bp) protein (459aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Glycine--tRNA ligase n=3 Tax=root RepID=D4JQT0_9FIRM
L2_047_000M1_scaffold_287_21
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22965..23222
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=root RepID=B0MN87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44225.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_287_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23259..27617
DNA (4359bp) protein (1453aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBK95448.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
hypothetical protein
L2_047_000M1_scaffold_287_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27713..28573
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQS8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95447.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28583..29455
DNA (873bp) protein (291aa)
Cobalt transport protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQS7_9FIRM
Cobalt transport protein.
Cobalt transport protein {ECO:0000313|EMBL:CBK95446.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29442..31970
DNA (2529bp) protein (843aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQS6_9FIRM
ATPase components of various ABC-type transport systems, contain duplicated ATPase {ECO:0000313|EMBL:CBK95445.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L2_047_000M1_scaffold_287_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32101..32376
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQS5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95444.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32533..33441)
DNA (909bp) protein (303aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Eubacterium siraeum RepID=D4MIG3_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL33546.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_287_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33450..34370)
DNA (921bp) protein (307aa)
ABC-type sugar transport systems, permease components n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQS3_9FIRM
ABC-type sugar transport systems, permease components
ABC-type sugar transport systems, permease components {ECO:0000313|EMBL:CBK95442.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34511..35944)
DNA (1434bp) protein (478aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQS2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95441.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_287_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36655..37473
DNA (819bp) protein (273aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CBK95439.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CBK95439.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQS0_9FIRM
Displaying items 1-30 of 88 in total

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