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L2_047_000M1_scaffold_306

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_306_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(122..871)
DNA (750bp) protein (250aa)
Predicted phosphohydrolases n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQW8_9FIRM
Predicted phosphohydrolases
Predicted phosphohydrolases {ECO:0000313|EMBL:CBK95487.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(994..1485)
DNA (492bp) protein (164aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Deoxycytidylate deaminase {ECO:0000313|EMBL:CBL33525.1}; EC=3.5.4.12 {ECO:0000313|EMBL:CBL33525.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Deoxycytidylate deaminase n=5 Tax=root RepID=D4JQW9_9FIRM
L2_047_000M1_scaffold_306_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1813..3591)
DNA (1779bp) protein (593aa)
Na/Pi-cotransporter n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQX0_9FIRM
Na/Pi-cotransporter {ECO:0000313|EMBL:CBK95489.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Na/Pi-cotransporter
L2_047_000M1_scaffold_306_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3820..4698)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RYM0_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95490.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4702..5088)
DNA (387bp) protein (129aa)
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=3 Tax=Eubacterium siraeum RepID=D4JQX2_9FIRM
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CBK95491.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5142..5930)
DNA (789bp) protein (263aa)
Uncharacterized conserved protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQX3_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK95492.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5939..7144)
DNA (1206bp) protein (402aa)
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642, ECO:0000313|EMBL:CBK95493.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
LL-diaminopimelate aminotransferase n=2 Tax=Eubacterium RepID=D4JQX4_9FIRM
L2_047_000M1_scaffold_306_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7496..11791
DNA (4296bp) protein (1432aa)
CoA-substrate-specific enzyme activase, putative n=2 Tax=root RepID=D4JQX5_9FIRM
CoA-substrate-specific enzyme activase, putative
CoA-substrate-specific enzyme activase, putative {ECO:0000313|EMBL:CBK95494.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11859..12788
DNA (930bp) protein (310aa)
Membrane protease subunits, stomatin/prohibitin homologs n=4 Tax=root RepID=D4JQX6_9FIRM
Membrane protease subunits, stomatin/prohibitin homologs
Membrane protease subunits, stomatin/prohibitin homologs {ECO:0000313|EMBL:CBL33518.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_306_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12912..15290
DNA (2379bp) protein (793aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RM79_9FIRM
L2_047_000M1_scaffold_306_11

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15532..16188
DNA (657bp) protein (219aa)
Phosphatase/phosphohexomutase n=1 Tax=human gut metagenome RepID=K1SVS5_9ZZZZ
Phosphatase/phosphohexomutase {ECO:0000313|EMBL:EKC57960.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L2_047_000M1_scaffold_306_12

Not on your lists

comp(16230..16478)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4JQY0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKC57961.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_047_000M1_scaffold_306_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16837..17886
DNA (1050bp) protein (350aa)
Heat-inducible transcription repressor hrcA n=2 Tax=root RepID=D4JQY1_9FIRM
heat shock gene repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17883..18443
DNA (561bp) protein (187aa)
Protein GrpE n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNB1_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
GrpE protein
L2_047_000M1_scaffold_306_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18517..20364
DNA (1848bp) protein (616aa)
Chaperone protein DnaK n=3 Tax=root RepID=D4JQY2_9FIRM
chaperone protein DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332, ECO:0000313|EMBL:CBK95501.1}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20466..21650
DNA (1185bp) protein (395aa)
Chaperone protein DnaJ n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQY3_9FIRM
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21790..22845
DNA (1056bp) protein (352aa)
Predicted xylanase/chitin deacetylase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQY4_9FIRM
Predicted xylanase/chitin deacetylase
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CBK95503.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_18

Not on your lists

22965..23861
DNA (897bp) protein (299aa)
Diacylglycerol kinase catalytic region n=1 Tax=human gut metagenome RepID=K1S966_9ZZZZ
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:EKC53988.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L2_047_000M1_scaffold_306_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23870..24232
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQY6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95505.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_20
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25340..26758
DNA (1419bp) protein (473aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RSF4_9FIRM
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CDC48274.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L2_047_000M1_scaffold_306_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26742..27827
DNA (1086bp) protein (362aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=2 Tax=Eubacterium RepID=R6RYW3_9FIRM
L2_047_000M1_scaffold_306_22
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27842..28630
DNA (789bp) protein (263aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=4 Tax=Eubacterium RepID=D4JQY9_9FIRM
L2_047_000M1_scaffold_306_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28641..29885
DNA (1245bp) protein (415aa)
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Gamma-glutamyl phosphate reductase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQZ0_9FIRM
L2_047_000M1_scaffold_306_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29901..30716
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS00852.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L2_047_000M1_scaffold_306_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31105..32655
DNA (1551bp) protein (517aa)
SSS sodium solute transporter superfamily n=2 Tax=root RepID=D4JQZ2_9FIRM
SSS sodium solute transporter superfamily
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:CBK95511.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33298..33492)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQZ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95512.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33525..36047)
DNA (2523bp) protein (841aa)
Ferrous iron transporter FeoB n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQZ4_9FIRM
ferrous iron transporter FeoB
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CBK95513.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_28
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36142..36363)
DNA (222bp) protein (74aa)
Fe2+ transport system protein A n=5 Tax=root RepID=D4JQZ5_9FIRM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:CDC44571.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_306_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36389..36601)
DNA (213bp) protein (71aa)
FeoA domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQZ6_9FIRM
FeoA domain.
FeoA domain {ECO:0000313|EMBL:CBK95515.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_306_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37132..38139
DNA (1008bp) protein (336aa)
Predicted glycosylase n=6 Tax=root RepID=D4JQZ7_9FIRM
Predicted glycosylase
Uncharacterized protein {ECO:0000313|EMBL:EDS00859.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Displaying items 1-30 of 84 in total

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