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L2_047_000M1_scaffold_309

Search features with annotation key words

Displaying items 31-60 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_309_31
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35104..37485)
DNA (2382bp) protein (794aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Endonuclease MutS2 n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTF2_9FIRM
MutS2 family protein
L2_047_000M1_scaffold_309_32
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37503..38267)
DNA (765bp) protein (255aa)
DNA repair protein RecO n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTF3_9FIRM
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_33
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38295..39203)
DNA (909bp) protein (303aa)
GTPase Era n=3 Tax=Eubacterium siraeum RepID=D4JTF4_9FIRM
GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_309_34
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39196..39603)
DNA (408bp) protein (136aa)
Prokaryotic diacylglycerol kinase n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLA1_9FIRM
Prokaryotic diacylglycerol kinase {ECO:0000313|EMBL:EDS01515.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
diacylglycerol kinase
L2_047_000M1_scaffold_309_35
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39691..40185)
DNA (495bp) protein (165aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Endoribonuclease YbeY n=2 Tax=Eubacterium siraeum RepID=D4JTF5_9FIRM
conserved hypothetical protein TIGR00043
L2_047_000M1_scaffold_309_36
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(40211..41173)
DNA (963bp) protein (321aa)
KH domain protein n=2 Tax=Eubacterium RepID=B0ML99_9FIRM
KH domain protein {ECO:0000313|EMBL:CDC47136.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L2_047_000M1_scaffold_309_37
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41281..42474)
DNA (1194bp) protein (398aa)
Putative stage IV sporulation protein YqfD n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTF7_9FIRM
Putative stage IV sporulation protein YqfD.
Putative stage IV sporulation protein YqfD {ECO:0000313|EMBL:CBK96376.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_38
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42471..42758)
DNA (288bp) protein (96aa)
YabP family n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RH91_9FIRM
YabP family {ECO:0000313|EMBL:CDC47140.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
YabP family.
L2_047_000M1_scaffold_309_39
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42973..43857
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SKP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47142.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L2_047_000M1_scaffold_309_40
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43961..44173
DNA (213bp) protein (71aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=B0ML79_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96379.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_41
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44410..45825
DNA (1416bp) protein (472aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=2 Tax=root RepID=R6RVT9_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC47146.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_047_000M1_scaffold_309_42
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46143..46976)
DNA (834bp) protein (278aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:CBK96381.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CBK96381.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=3 Tax=root RepID=D4JTG2_9FIRM
L2_047_000M1_scaffold_309_43
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47121..48155)
DNA (1035bp) protein (345aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTG3_9FIRM
L2_047_000M1_scaffold_309_44
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48366..48686)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01056.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L2_047_000M1_scaffold_309_45
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48886..50451
DNA (1566bp) protein (522aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JQL8_9FIRM
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBK95387.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
HAD-superfamily hydrolase, subfamily IIB
L2_047_000M1_scaffold_309_46

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comp(50496..51119)
DNA (624bp) protein (208aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=root RepID=D4JTG4_9FIRM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EKC81089.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_047_000M1_scaffold_309_47
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51116..52237)
DNA (1122bp) protein (374aa)
Histidine kinase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RG16_9FIRM
Histidine kinase {ECO:0000313|EMBL:CDC44269.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
histidine kinase dimerization and phosphoacceptor region
L2_047_000M1_scaffold_309_48
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52253..53389)
DNA (1137bp) protein (379aa)
ABC-type multidrug transport system, permease component n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MM30_9FIRM
ABC-type multidrug transport system, permease component
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:CBL34813.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_309_49
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53404..54498)
DNA (1095bp) protein (365aa)
ABC-2 type transporter n=2 Tax=root RepID=R6SCE0_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:CDC44272.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
ABC-2 type transporter.
L2_047_000M1_scaffold_309_50
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54510..55454)
DNA (945bp) protein (315aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R5P1_9FIRM
ABC-type multidrug transport system, ATPase component
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC44273.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_309_51
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55619..58213)
DNA (2595bp) protein (865aa)
X-X-X-Leu-X-X-Gly heptad repeats n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTG7_9FIRM
X-X-X-Leu-X-X-Gly heptad repeats {ECO:0000313|EMBL:CBK96386.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
X-X-X-Leu-X-X-Gly heptad repeats
L2_047_000M1_scaffold_309_52
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58228..60318)
DNA (2091bp) protein (697aa)
Predicted exporters of the RND superfamily n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MM26_9FIRM
Predicted exporters of the RND superfamily {ECO:0000313|EMBL:CBL34809.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Predicted exporters of the RND superfamily
L2_047_000M1_scaffold_309_53
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60311..60910)
DNA (600bp) protein (200aa)
Uncharacterized conserved protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTG9_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK96388.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_54
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61140..61703
DNA (564bp) protein (188aa)
Transcriptional regulator n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTH0_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBK96389.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_55
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62084..63052
DNA (969bp) protein (323aa)
Tim44-like domain n=2 Tax=root RepID=D4JTH1_9FIRM
Tim44-like domain.
Tim44-like domain {ECO:0000313|EMBL:CBK96390.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_56
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63054..63818
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RG26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44279.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_309_57
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63851..65242
DNA (1392bp) protein (464aa)
Putative virion core protein (Lumpy skin disease virus) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTH2_9FIRM
Putative virion core protein (lumpy skin disease virus)
Putative virion core protein (Lumpy skin disease virus) {ECO:0000313|EMBL:CBK96391.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_58
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65288..66427
DNA (1140bp) protein (380aa)
Na+/H+ antiporter NhaD and related arsenite permeases n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTH3_9FIRM
Na+/H+ antiporter NhaD and related arsenite permeases
Na+/H+ antiporter NhaD and related arsenite permeases {ECO:0000313|EMBL:CBK96392.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_59
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66404..67195)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTH4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96393.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_60
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67633..68244)
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=B0MNR2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC46177.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Displaying items 31-60 of 137 in total

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