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L2_047_000M1_scaffold_309

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Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_309_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(264..1100)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTB7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96336.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1126..1293)
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTB8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96337.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1486..2814
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RL57_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDC46009.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
putative efflux protein, MATE family
L2_047_000M1_scaffold_309_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2937..3515
DNA (579bp) protein (193aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTC0_9FIRM
L2_047_000M1_scaffold_309_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3469..4062
DNA (594bp) protein (198aa)
Maf-like protein BN788_00117 n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RDW2_9FIRM
Maf-like protein BN788_00117 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
MAF protein
L2_047_000M1_scaffold_309_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4077..4340
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MM66_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34849.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_309_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4521..5429
DNA (909bp) protein (303aa)
Predicted transcriptional regulators n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTC2_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK96341.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5416..7272
DNA (1857bp) protein (619aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLD1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS01545.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
ABC-type multidrug transport system, ATPase and permease components
L2_047_000M1_scaffold_309_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7265..9079
DNA (1815bp) protein (605aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTC4_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK96343.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9134..11194)
DNA (2061bp) protein (687aa)
Small GTP-binding protein domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTC5_9FIRM
Small GTP-binding protein domain {ECO:0000313|EMBL:CBK96344.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
small GTP-binding protein domain
L2_047_000M1_scaffold_309_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11259..14165)
DNA (2907bp) protein (969aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLC3_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDS01542.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_047_000M1_scaffold_309_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14604..15581
DNA (978bp) protein (326aa)
Acetyltransferases n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MM61_9FIRM
Acetyltransferases
Acetyltransferases {ECO:0000313|EMBL:CBL34844.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_309_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16050..16886
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTD0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96349.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_14
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17215..17670
DNA (456bp) protein (152aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R5E7_9FIRM
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CDC44168.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_309_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17757..18830)
DNA (1074bp) protein (358aa)
Tyrosine recombinase XerC n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTD1_9FIRM
Site-specific recombinase XerD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19534..20376)
DNA (843bp) protein (281aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist {ECO:0000313|EMBL:CBL34839.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBL34839.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist n=3 Tax=Eubacterium RepID=D4JTD9_9FIRM
L2_047_000M1_scaffold_309_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20522..20773)
DNA (252bp) protein (84aa)
Transcriptional regulator, AbrB family n=4 Tax=root RepID=D4JTE0_9FIRM
transcriptional regulator, AbrB family
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:CBL34838.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_309_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21144..21740
DNA (597bp) protein (199aa)
Uncharacterized membrane protein, required for spore maturation in B.subtilis n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTE2_9FIRM
Uncharacterized membrane protein, required for spore maturation in B.subtilis.
Uncharacterized membrane protein, required for spore maturation in B.subtilis {ECO:0000313|EMBL:CBK96361.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21737..22258
DNA (522bp) protein (174aa)
Uncharacterized membrane protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTE3_9FIRM
Uncharacterized membrane protein
Uncharacterized membrane protein {ECO:0000313|EMBL:CBK96362.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22298..22783)
DNA (486bp) protein (162aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTE4_9FIRM
ybaK/ebsC protein
L2_047_000M1_scaffold_309_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22843..24045)
DNA (1203bp) protein (401aa)
Hydrogenase maturation GTPase HydF n=3 Tax=root RepID=B0MLA9_9FIRM
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:EDS01528.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
iron-only hydrogenase maturation protein HydF
L2_047_000M1_scaffold_309_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24072..25496)
DNA (1425bp) protein (475aa)
Iron-only hydrogenase maturation protein HydG n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTE5_9FIRM
iron-only hydrogenase maturation protein HydG
Iron-only hydrogenase maturation protein HydG {ECO:0000313|EMBL:CBK96364.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_23
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25499..26566)
DNA (1068bp) protein (356aa)
hydE; HydE (EC:2.8.1.6)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RFS2_9FIRM
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:CDC44159.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_309_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26563..26850)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTE6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96365.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27333..27596)
DNA (264bp) protein (88aa)
Late competence development protein ComFB n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTE7_9FIRM
Late competence development protein ComFB.
Late competence development protein ComFB {ECO:0000313|EMBL:CBK96366.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27762..30635
DNA (2874bp) protein (958aa)
Protein translocase subunit SecA n=3 Tax=root RepID=B0MLC4_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
secA; Protein translocase subunit SecA
L2_047_000M1_scaffold_309_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30747..32030
DNA (1284bp) protein (428aa)
Uncharacterized conserved protein n=2 Tax=root RepID=D4JTE8_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK96367.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32047..33207
DNA (1161bp) protein (387aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Cellobiose 2-epimerase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTE9_9FIRM
N-acyl-D-glucosamine 2-epimerase
L2_047_000M1_scaffold_309_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33225..34325
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTF0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96369.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_309_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34387..35085)
DNA (699bp) protein (233aa)
Predicted phosphatases n=2 Tax=root RepID=D4JTF1_9FIRM
Predicted phosphatases
Predicted phosphatases {ECO:0000313|EMBL:CBK96370.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Displaying items 1-30 of 137 in total

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