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L2_047_000M1_scaffold_539

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_539_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..555
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01835.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L2_047_000M1_scaffold_539_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

868..3525
DNA (2658bp) protein (886aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.1.1.1 1.2.1.10)
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE n=2 Tax=Eubacterium RepID=D4JWE6_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4051..5352
DNA (1302bp) protein (434aa)
Predicted ATPase (AAA+ superfamily) n=2 Tax=root RepID=D4JWE5_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBK97414.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5662..6354
DNA (693bp) protein (231aa)
Prepilin-type N-terminal cleavage/methylation domain n=2 Tax=root RepID=D4JWE4_9FIRM
prepilin-type N-terminal cleavage/methylation domain
Prepilin-type N-terminal cleavage/methylation domain {ECO:0000313|EMBL:CBK97413.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6409..7419
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWE3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97412.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7509..8177
DNA (669bp) protein (223aa)
Prepilin-type N-terminal cleavage/methylation domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWE2_9FIRM
prepilin-type N-terminal cleavage/methylation domain
Prepilin-type N-terminal cleavage/methylation domain {ECO:0000313|EMBL:CBK97411.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8247..9509
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJ29_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33762.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_539_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9496..10404
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWE1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97410.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11406..12614
DNA (1209bp) protein (403aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
RNA-splicing ligase RtcB n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MK28_9FIRM
hypothetical protein
L2_047_000M1_scaffold_539_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12646..14091
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RKZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43726.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L2_047_000M1_scaffold_539_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14604..15038)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWE0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97409.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15178..15954)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWD9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97408.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16161..16910
DNA (750bp) protein (250aa)
Response regulator receiver domain protein n=2 Tax=Eubacterium siraeum RepID=B0MK21_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS01956.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Response regulator of the LytR/AlgR family
L2_047_000M1_scaffold_539_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16907..18241
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MK20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01955.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L2_047_000M1_scaffold_539_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18526..20919)
DNA (2394bp) protein (798aa)
Glycosyltransferase family 36 n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MK19_9FIRM
Glycosyltransferase family 36 {ECO:0000313|EMBL:EDS01954.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
glycosyltransferase
L2_047_000M1_scaffold_539_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21235..22167
DNA (933bp) protein (311aa)
Predicted permeases n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWD4_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBK97403.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22195..23028
DNA (834bp) protein (278aa)
Hydroxyethylthiazole kinase, sugar kinase family (EC:2.7.1.50)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Hydroxyethylthiazole kinase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWD3_9FIRM
L2_047_000M1_scaffold_539_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23033..23425
DNA (393bp) protein (131aa)
Uncharacterized domain 1 n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWD2_9FIRM
uncharacterized domain 1
Uncharacterized domain 1 {ECO:0000313|EMBL:CBK97401.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23671..23871
DNA (201bp) protein (67aa)
TM2 domain n=3 Tax=Eubacterium siraeum RepID=D4MJ38_9FIRM
TM2 domain.
TM2 domain {ECO:0000313|EMBL:CBL33771.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_539_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23925..24347)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWD0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97399.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24359..24745)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWC9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97398.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24761..25372)
DNA (612bp) protein (204aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJ41_9FIRM
Biopolymer transport protein ExbD/TolR.
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:CBL33774.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_539_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25369..25833)
DNA (465bp) protein (155aa)
MotA/TolQ/ExbB proton channel family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWC6_9FIRM
MotA/TolQ/ExbB proton channel family.
MotA/TolQ/ExbB proton channel family {ECO:0000313|EMBL:CBK97395.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25945..26148)
DNA (204bp) protein (68aa)
Mn-containing catalase n=2 Tax=Eubacterium siraeum RepID=D4JWC5_9FIRM
Mn-containing catalase
Uncharacterized protein {ECO:0000313|EMBL:EDS01944.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L2_047_000M1_scaffold_539_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26158..26412)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWC4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97393.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_26
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26402..26602)
DNA (201bp) protein (67aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6SHL0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC46102.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_539_27
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26966..27508
DNA (543bp) protein (181aa)
ThiW protein n=4 Tax=Eubacterium RepID=D4JWC2_9FIRM
thiW protein
Protein ThiW {ECO:0000313|EMBL:CDC46103.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_539_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27559..28743)
DNA (1185bp) protein (395aa)
Predicted multitransmembrane protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWC1_9FIRM
Predicted multitransmembrane protein
Predicted multitransmembrane protein {ECO:0000313|EMBL:CBK97390.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_539_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28808..30694)
DNA (1887bp) protein (629aa)
Calcineurin-like phosphoesterase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWC0_9FIRM
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:CBK97389.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Calcineurin-like phosphoesterase.
L2_047_000M1_scaffold_539_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30849..32366)
DNA (1518bp) protein (506aa)
ATPase components of ABC transporters with duplicated ATPase domains n=2 Tax=root RepID=D4JWB9_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CBK97388.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Displaying items 1-30 of 38 in total

View Taxonomy