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L2_047_000M1_scaffold_583

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_583_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..377
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS14_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95883.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_583_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(824..1549)
DNA (726bp) protein (242aa)
Phosphoenolpyruvate-protein phosphotransferase domain protein {ECO:0000313|EMBL:EDR99428.1}; EC=2.7.3.9 {ECO:0000313|EMBL:EDR99428.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
ptsI1; Phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRL0_9FIRM
L2_047_000M1_scaffold_583_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2359..4905)
DNA (2547bp) protein (849aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R7A5_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDC43785.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Signal transduction histidine kinase
L2_047_000M1_scaffold_583_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4898..5749)
DNA (852bp) protein (284aa)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS15_9FIRM
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CBK95884.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_583_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6039..6734)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS16_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95885.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_583_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6990..7973
DNA (984bp) protein (328aa)
ABC-type uncharacterized transport system, ATPase component n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKE8_9FIRM
ABC-type uncharacterized transport system, ATPase component
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:CBL34231.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_583_7
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7970..9325
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RL37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43776.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Na+ efflux pump permease-like protein
L2_047_000M1_scaffold_583_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9348..11276
DNA (1929bp) protein (643aa)
Fibronectin type III domain n=3 Tax=root RepID=D4JS18_9FIRM
Fibronectin type III domain {ECO:0000313|EMBL:CBK95887.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Fibronectin type III domain.
L2_047_000M1_scaffold_583_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11300..11785
DNA (486bp) protein (162aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000313|EMBL:CBK95888.1}; EC=1.5.1.3 {ECO:0000313|EMBL:CBK95888.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Dihydrofolate reductase n=2 Tax=root RepID=D4JS19_9FIRM
L2_047_000M1_scaffold_583_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12153..12572
DNA (420bp) protein (140aa)
Protein MraZ n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6REM2_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
mraZ protein
L2_047_000M1_scaffold_583_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12585..13511
DNA (927bp) protein (309aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRM0_9FIRM
L2_047_000M1_scaffold_583_12

Not on your lists

13527..14021
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=root RepID=K1T496_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKC67832.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_047_000M1_scaffold_583_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14173..16428
DNA (2256bp) protein (752aa)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS22_9FIRM
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CBK95891.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Cell division protein FtsI/penicillin-binding protein 2
L2_047_000M1_scaffold_583_14
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16460..17914
DNA (1455bp) protein (485aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.7 {ECO:0000256|HAMAP-Rule:MF_00208};; L-lysine-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:L-Lys ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
murE; UDP-N-acetylmuramyl-tripeptide synthetase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6REL4_9FIRM
L2_047_000M1_scaffold_583_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17918..18934
DNA (1017bp) protein (339aa)
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038, ECO:0000313|EMBL:CBK95892.1}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038, ECO:0000313|EMBL:CBK95892.1};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS23_9FIRM
L2_047_000M1_scaffold_583_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18963..20447
DNA (1485bp) protein (495aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=2 Tax=root RepID=B0MRM5_9FIRM
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EDR99443.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Bacterial cell division membrane protein
L2_047_000M1_scaffold_583_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20474..21595
DNA (1122bp) protein (374aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=3 Tax=root RepID=D4JS24_9FIRM
L2_047_000M1_scaffold_583_18
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21657..22922
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R4A3_9FIRM
L2_047_000M1_scaffold_583_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22940..24481
DNA (1542bp) protein (514aa)
Cell division septal protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS25_9FIRM
Cell division septal protein
Cell division septal protein {ECO:0000313|EMBL:CBK95894.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_583_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24657..25832
DNA (1176bp) protein (392aa)
Cell division protein FtsZ n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS26_9FIRM
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_583_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25982..28639)
DNA (2658bp) protein (886aa)
ABC-type antimicrobial peptide transport system, ATPase component n=3 Tax=root RepID=D4JS27_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK95896.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_047_000M1_scaffold_583_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28715..29845)
DNA (1131bp) protein (377aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Signal transduction histidine kinase n=2 Tax=root RepID=D4JS28_9FIRM
Signal transduction histidine kinase
L2_047_000M1_scaffold_583_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29865..30542)
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R432_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDR99450.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_047_000M1_scaffold_583_24
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30939..32630)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SAL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43667.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L2_047_000M1_scaffold_583_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32648..33940)
DNA (1293bp) protein (431aa)
Predicted membrane protein involved in D-alanine export n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS30_9FIRM
Predicted membrane protein involved in D-alanine export
Predicted membrane protein involved in D-alanine export {ECO:0000313|EMBL:CBK95899.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_583_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34487..36340)
DNA (1854bp) protein (618aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS31_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95900.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_583_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36354..37133)
DNA (780bp) protein (260aa)
Site-specific DNA methylase (EC:2.1.1.72)
Site-specific DNA methylase {ECO:0000313|EMBL:CBK95901.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CBK95901.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Site-specific DNA methylase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS32_9FIRM
L2_047_000M1_scaffold_583_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37169..37420)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS33_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95902.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_583_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37432..38148)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS34_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95903.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_583_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38149..38340)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS35_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95904.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Displaying items 1-30 of 34 in total

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