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L2_047_000M1_scaffold_718

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_718_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..988
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FA04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06716.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative glycosyl hydrolase
L2_047_000M1_scaffold_718_2
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1070..1492
DNA (423bp) protein (141aa)
Toxin secretion/phage lysis holin n=2 Tax=Firmicutes RepID=H1ASZ7_9FIRM
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:CDA79309.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
holin
L2_047_000M1_scaffold_718_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1495..2466
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4N5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39885.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Muramidase (flagellum-specific)
L2_047_000M1_scaffold_718_4
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2586..3008
DNA (423bp) protein (141aa)
LIM domain protein n=4 Tax=Enterococcus faecium RepID=J6X3D8_ENTFC
LIM domain protein {ECO:0000313|EMBL:EJX87096.1}; TaxID=1134825 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium ERV38.;"
hypothetical protein
L2_047_000M1_scaffold_718_5
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3001..3177
DNA (177bp) protein (59aa)
Uncharacterized protein n=4 Tax=Enterococcus faecium RepID=J6C1L6_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EJX40198.1}; TaxID=1134839 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R501.;"
hypothetical protein
L2_047_000M1_scaffold_718_6
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3221..4987
DNA (1767bp) protein (589aa)
Resolvase protein n=4 Tax=Enterococcus faecium RepID=J5U8R3_ENTFC
Resolvase protein {ECO:0000313|EMBL:EJX40197.1}; TaxID=1134839 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R501.;"
site-specific recombinase
L2_047_000M1_scaffold_718_7
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4926..6497
DNA (1572bp) protein (524aa)
Resolvase protein n=4 Tax=Enterococcus faecium RepID=J6CP47_ENTFC
Resolvase protein {ECO:0000313|EMBL:EJX87762.1}; TaxID=1134824 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium ERV26.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_047_000M1_scaffold_718_8
Streptococcus equinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(6567..7928)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J6HM66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KFN88026.1}; TaxID=1294274 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equinus JB1.;"
hypothetical protein
L2_047_000M1_scaffold_718_9
unknown

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comp(7925..8272)
DNA (348bp) protein (116aa)

This feature has no annotations

L2_047_000M1_scaffold_718_10
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8285..8830)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B57B9B
Uncharacterized protein {ECO:0000313|EMBL:EFR38782.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_047_000M1_scaffold_718_11
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8835..9332)
DNA (498bp) protein (166aa)
HTH-type 3 domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYM4_CLOA9
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIQ62435.1}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
L2_047_000M1_scaffold_718_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9459..10829)
DNA (1371bp) protein (457aa)
X-X-X-Leu-X-X-Gly heptad repeats n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRV7_9FIRM
X-X-X-Leu-X-X-Gly heptad repeats
X-X-X-Leu-X-X-Gly heptad repeats {ECO:0000313|EMBL:CBK95826.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_718_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10831..11532)
DNA (702bp) protein (234aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRV6_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK95825.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_718_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11644..12273)
DNA (630bp) protein (210aa)
Transcriptional regulator n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRV5_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBK95824.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_718_15
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12638..13237
DNA (600bp) protein (200aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SSV5_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
redox-sensing transcriptional repressor Rex
L2_047_000M1_scaffold_718_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13270..13518
DNA (249bp) protein (83aa)
NADH:ubiquinone oxidoreductase 24 kD subunit n=5 Tax=root RepID=D4JRV4_9FIRM
NADH:ubiquinone oxidoreductase 24 kD subunit
NADH:ubiquinone oxidoreductase 24 kD subunit {ECO:0000313|EMBL:CBK95823.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_718_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13558..13941
DNA (384bp) protein (128aa)
Thioesterase superfamily n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRV3_9FIRM
Thioesterase superfamily
Thioesterase superfamily {ECO:0000313|EMBL:CBK95822.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_718_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13945..15627
DNA (1683bp) protein (561aa)
Iron only hydrogenase large subunit, C-terminal domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRV2_9FIRM
Iron only hydrogenase large subunit, C-terminal domain {ECO:0000313|EMBL:CBK95821.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Iron only hydrogenase large subunit, C-terminal domain
L2_047_000M1_scaffold_718_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15614..16801
DNA (1188bp) protein (396aa)
Stage II sporulation protein E (SpoIIE) n=2 Tax=Eubacterium siraeum RepID=D4JRV1_9FIRM
Stage II sporulation protein E (SpoIIE).
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:CBK95820.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_718_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16897..18384
DNA (1488bp) protein (496aa)
Iron only hydrogenase large subunit, C-terminal domain n=2 Tax=Eubacterium siraeum RepID=D4JRV0_9FIRM
Iron only hydrogenase large subunit, C-terminal domain
Iron only hydrogenase large subunit, C-terminal domain {ECO:0000313|EMBL:CBL34163.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_718_21
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18448..19395
DNA (948bp) protein (316aa)
Transcriptional regulator, LysR family n=2 Tax=Eubacterium RepID=B0MNW7_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDC49673.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Transcriptional regulator
L2_047_000M1_scaffold_718_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19431..20438
DNA (1008bp) protein (336aa)
Cellulase M and related proteins (EC:3.2.1.4)
Cellulase M and related proteins {ECO:0000313|EMBL:CBK95817.1}; EC=3.2.1.4 {ECO:0000313|EMBL:CBK95817.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Cellulase M and related proteins n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRU8_9FIRM
L2_047_000M1_scaffold_718_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20431..21456
DNA (1026bp) protein (342aa)
Cellulase M and related proteins (EC:3.2.1.4)
Cellulase M and related proteins {ECO:0000313|EMBL:CBK95816.1}; EC=3.2.1.4 {ECO:0000313|EMBL:CBK95816.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Cellulase M and related proteins n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRU7_9FIRM
L2_047_000M1_scaffold_718_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21453..22175
DNA (723bp) protein (241aa)
Acetyltransferase (GNAT) family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRU6_9FIRM
Acetyltransferase (GNAT) family.
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CBK95815.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_718_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22178..23437
DNA (1260bp) protein (420aa)
Cystathionine beta-lyase family protein involved in aluminum resistance n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRU5_9FIRM
Cystathionine beta-lyase family protein involved in aluminum resistance
Cystathionine beta-lyase family protein involved in aluminum resistance {ECO:0000313|EMBL:CBK95814.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_718_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23508..24386
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRU4_9FIRM
conserved hypothetical protein TIGR00255
Uncharacterized protein {ECO:0000313|EMBL:CBK95813.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_718_27
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24572..25699)
DNA (1128bp) protein (376aa)
Metallo-beta-lactamase domain protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6S2W0_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDC49661.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L2_047_000M1_scaffold_718_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25829..28432)
DNA (2604bp) protein (868aa)
ATP-dependent chaperone ClpB n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RPQ4_9FIRM
ATP-dependent chaperone ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L2_047_000M1_scaffold_718_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28466..29134)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4JRU2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95811.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Displaying 29 items

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