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L2_047_000M1_scaffold_869

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_869_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1173)
DNA (1173bp) protein (391aa)
Putative efflux protein, MATE family n=2 Tax=root RepID=D4JVT9_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK97208.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_869_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1474..2814
DNA (1341bp) protein (447aa)
Glycosyl hydrolase family 25 n=2 Tax=Eubacterium RepID=B0MR33_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EDR99949.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L2_047_000M1_scaffold_869_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2894..4288)
DNA (1395bp) protein (465aa)
Na+-driven multidrug efflux pump n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RIZ7_9FIRM
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:CDC45304.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Na+-driven multidrug efflux pump
L2_047_000M1_scaffold_869_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4315..4755)
DNA (441bp) protein (147aa)
Transcriptional regulator MarR family n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RQD7_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDC45306.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
MarR family transcriptional regulator
L2_047_000M1_scaffold_869_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5173..5535)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVU6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97215.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_869_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5860..7260
DNA (1401bp) protein (467aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Eubacterium RepID=B0MJW1_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDC45310.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
FAD dependent oxidoreductase
L2_047_000M1_scaffold_869_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7277..7852
DNA (576bp) protein (192aa)
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Xanthine phosphoribosyltransferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVU7_9FIRM
L2_047_000M1_scaffold_869_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7925..9067
DNA (1143bp) protein (381aa)
Nucleoside-binding protein n=2 Tax=root RepID=D4JVU8_9FIRM
nucleoside-binding protein
Nucleoside-binding protein {ECO:0000313|EMBL:CBK97217.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_869_9
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9203..10735
DNA (1533bp) protein (511aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Nucleoside ABC transporter ATP-binding protein n=2 Tax=Eubacterium RepID=D4JVU9_9FIRM
Nucleoside ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC45316.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_869_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10732..11799
DNA (1068bp) protein (356aa)
Nucleoside ABC transporter membrane protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVV0_9FIRM
nucleoside ABC transporter membrane protein
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:CBK97219.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_869_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11799..12743
DNA (945bp) protein (315aa)
Nucleoside ABC transporter membrane protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVV1_9FIRM
nucleoside ABC transporter membrane protein
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:CBK97220.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_869_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13143..13631
DNA (489bp) protein (163aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVV2_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBK97221.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_869_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13600..15345
DNA (1746bp) protein (582aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4JVV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBK97222.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
hypothetical protein
L2_047_000M1_scaffold_869_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15466..16023
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4JVV3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97222.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_869_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16442..17662
DNA (1221bp) protein (407aa)
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Phosphoglycerate kinase n=2 Tax=root RepID=D4JVV4_9FIRM
L2_047_000M1_scaffold_869_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17744..18517
DNA (774bp) protein (258aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Triosephosphate isomerase n=4 Tax=root RepID=D4JVV5_9FIRM
L2_047_000M1_scaffold_869_17
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18557..20158
DNA (1602bp) protein (534aa)
Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) {ECO:0000256|SAAS:SAAS00058367}; EC=5.4.2.12 {ECO:0000256|SAAS:SAAS00058367};; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
phosphoglycerate mutase (EC:5.4.2.1)
Phosphoglycerate mutase n=4 Tax=Eubacterium RepID=D4JVV6_9FIRM
L2_047_000M1_scaffold_869_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20988..21476)
DNA (489bp) protein (163aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CBK97227.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CBK97227.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVV8_9FIRM
L2_047_000M1_scaffold_869_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21463..23952)
DNA (2490bp) protein (830aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460, ECO:0000313|EMBL:CBK97228.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
DNA polymerase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVV9_9FIRM
L2_047_000M1_scaffold_869_20
unknown

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comp(24076..24444)
DNA (369bp) protein (123aa)

This feature has no annotations

L2_047_000M1_scaffold_869_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24401..25801)
DNA (1401bp) protein (467aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVW0_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK97229.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_869_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25829..27646)
DNA (1818bp) protein (606aa)
Predicted membrane protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVW1_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CBK97230.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Predicted membrane protein
L2_047_000M1_scaffold_869_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27661..28182)
DNA (522bp) protein (174aa)
Predicted Zn peptidase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVW2_9FIRM
Predicted Zn peptidase
Predicted Zn peptidase {ECO:0000313|EMBL:CBK97231.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_869_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28176..28586)
DNA (411bp) protein (137aa)
Predicted transcriptional regulators n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVW3_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK97232.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_869_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28597..28956)
DNA (360bp) protein (120aa)
Endoribonuclease L-PSP n=4 Tax=Eubacterium RepID=B0MR16_9FIRM
Putative translation initiation inhibitor, yjgF family
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:CBL33916.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_869_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29118..30356
DNA (1239bp) protein (413aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR15_9FIRM
L2_047_000M1_scaffold_869_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30404..31648)
DNA (1245bp) protein (415aa)
Saccharopine dehydrogenase {ECO:0000313|EMBL:EDR99931.1}; EC=1.5.1.7 {ECO:0000313|EMBL:EDR99931.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Saccharopine dehydrogenase (NAD+, L-lysine forming) (EC:1.5.1.7)
Saccharopine dehydrogenase n=3 Tax=root RepID=B0MR14_9FIRM
L2_047_000M1_scaffold_869_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31703..33583)
DNA (1881bp) protein (627aa)
Glycosidases {ECO:0000313|EMBL:CBK97234.1}; EC=3.2.1.41 {ECO:0000313|EMBL:CBK97234.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glycosidases (EC:3.2.1.41)
Glycosidases n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVW5_9FIRM
L2_047_000M1_scaffold_869_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33698..36097)
DNA (2400bp) protein (800aa)
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587, ECO:0000313|EMBL:CBK97235.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Phosphorylase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVW6_9FIRM
L2_047_000M1_scaffold_869_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36308..36973)
DNA (666bp) protein (222aa)
K+ transport systems, NAD-binding component n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVW7_9FIRM
K+ transport systems, NAD-binding component
K+ transport systems, NAD-binding component {ECO:0000313|EMBL:CBK97236.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Displaying items 1-30 of 38 in total

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