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L2_047_000M1_scaffold_905

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_905_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..246)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01835.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L2_047_000M1_scaffold_905_2
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(253..2793)
DNA (2541bp) protein (847aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R8A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45143.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L2_047_000M1_scaffold_905_3
unknown

Not on your lists

comp(2866..2979)
DNA (114bp) protein (38aa)

This feature has no annotations

L2_047_000M1_scaffold_905_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3155..4180)
DNA (1026bp) protein (342aa)
CAAX amino terminal protease family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWE9_9FIRM
CAAX amino terminal protease family.
CAAX amino terminal protease family {ECO:0000313|EMBL:CBK97418.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4199..5194)
DNA (996bp) protein (332aa)
CAAX amino terminal protease family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWF0_9FIRM
CAAX amino terminal protease family.
CAAX amino terminal protease family {ECO:0000313|EMBL:CBK97419.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5181..6050)
DNA (870bp) protein (290aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWF1_9FIRM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_7
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6110..7555)
DNA (1446bp) protein (482aa)
arginine decarboxylase (EC:4.1.1.18 4.1.1.19)
Arginine decarboxylase n=3 Tax=Eubacterium RepID=D4JWF2_9FIRM
Arginine decarboxylase {ECO:0000313|EMBL:CDC45652.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_905_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7693..8547)
DNA (855bp) protein (285aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
speD; S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKF5_9FIRM
L2_047_000M1_scaffold_905_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8695..9966)
DNA (1272bp) protein (424aa)
Sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWF3_9FIRM
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
Sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2) {ECO:0000313|EMBL:CBK97422.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10378..11574)
DNA (1197bp) protein (399aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase/2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60 4.6.1.12)
Bifunctional enzyme IspD/IspF n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWF5_9FIRM
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_11
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11700..12875)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CM58_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49128.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
putative transposase
L2_047_000M1_scaffold_905_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13080..14204)
DNA (1125bp) protein (375aa)
Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:CBK97425.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CBK97425.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Prephenate dehydratase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWF6_9FIRM
L2_047_000M1_scaffold_905_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14298..16007)
DNA (1710bp) protein (570aa)
PASTA domain./Protein kinase domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWF7_9FIRM
PASTA domain./Protein kinase domain.
PASTA domain./Protein kinase domain {ECO:0000313|EMBL:CBK97426.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16578..16895
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Eubacterium siraeum RepID=B0MKG4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97427.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17143..19896
DNA (2754bp) protein (918aa)
Predicted permease n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWF9_9FIRM
Predicted permease.
Predicted permease {ECO:0000313|EMBL:CBK97428.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19893..20546
DNA (654bp) protein (218aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWG0_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK97429.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_17
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21100..22143)
DNA (1044bp) protein (348aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=2 Tax=Eubacterium RepID=B0MKG7_9FIRM
Tryptophan--tRNA ligase {ECO:0000313|EMBL:CDC48488.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_905_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22865..24112)
DNA (1248bp) protein (416aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWG1_9FIRM
conserved hypothetical protein TIGR00275
Uncharacterized protein {ECO:0000313|EMBL:CBK97430.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24112..24972)
DNA (861bp) protein (287aa)
Transcriptional regulator, RpiR family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWG2_9FIRM
transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CBK97431.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25164..26108)
DNA (945bp) protein (315aa)
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D (EC:3.5.1.1)
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D {ECO:0000313|EMBL:CBK97432.1}; EC=3.5.1.1 {ECO:0000313|EMBL:CBK97432.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWG3_9FIRM
L2_047_000M1_scaffold_905_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26343..27239
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWG4_9FIRM
Protein of unknown function (DUF2628).
Uncharacterized protein {ECO:0000313|EMBL:CBK97433.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_22
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27283..29100
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RZP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48501.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_905_23
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29137..30501
DNA (1365bp) protein (455aa)
Potassium uptake protein TrkH family n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RI23_9FIRM
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CDC48503.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Trk-type K+ transport systems, membrane components
L2_047_000M1_scaffold_905_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30503..31240
DNA (738bp) protein (246aa)
Predicted O-methyltransferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWG6_9FIRM
Predicted O-methyltransferase
Predicted O-methyltransferase {ECO:0000313|EMBL:CBK97435.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31250..32080
DNA (831bp) protein (277aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWG7_9FIRM
conserved hypothetical protein TIGR00096
L2_047_000M1_scaffold_905_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32123..32278
DNA (156bp) protein (52aa)
Uncharacterized protein n=5 Tax=root RepID=B0MKB9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33733.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_905_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32354..32500
DNA (147bp) protein (49aa)
RSAM-modified six-cysteine peptide n=4 Tax=Eubacterium RepID=B0MKA5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97438.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32614..33987
DNA (1374bp) protein (458aa)
Arylsulfatase regulator (Fe-S oxidoreductase) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWH0_9FIRM
Arylsulfatase regulator (Fe-S oxidoreductase)
Arylsulfatase regulator (Fe-S oxidoreductase) {ECO:0000313|EMBL:CBK97439.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34053..34937)
DNA (885bp) protein (295aa)
Predicted metal-dependent hydrolase of the TIM-barrel fold n=2 Tax=root RepID=D4JWH1_9FIRM
Predicted metal-dependent hydrolase of the TIM-barrel fold
Predicted metal-dependent hydrolase of the TIM-barrel fold {ECO:0000313|EMBL:CBK97440.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_905_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34955..35449)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIZ6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33729.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Displaying items 1-30 of 47 in total

View Taxonomy