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L2_047_000M1_scaffold_912

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_912_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(244..1788)
DNA (1545bp) protein (515aa)
ABC-type sugar transport system, periplasmic component n=2 Tax=root RepID=D4JVH0_9FIRM
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBK97089.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_912_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2165..4468)
DNA (2304bp) protein (768aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVG9_9FIRM
L2_047_000M1_scaffold_912_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4633..5127
DNA (495bp) protein (165aa)
Sigma-70, region 4./ECF sigma factor n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVG8_9FIRM
Sigma-70, region 4./ECF sigma factor.
Sigma-70, region 4./ECF sigma factor {ECO:0000313|EMBL:CBK97087.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_912_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5144..7897
DNA (2754bp) protein (918aa)
Beta propeller domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVG7_9FIRM
Beta propeller domain {ECO:0000313|EMBL:CBK97086.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Beta propeller domain.
L2_047_000M1_scaffold_912_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7910..8395
DNA (486bp) protein (162aa)
HD domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVG6_9FIRM
HD domain.
HD domain {ECO:0000313|EMBL:CBK97085.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_912_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9179..10567)
DNA (1389bp) protein (463aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.97.-.- 1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=3 Tax=root RepID=B0MLR9_9FIRM
Glutamate synthase (NADPH) homotetrameric {ECO:0000313|EMBL:CDC48794.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_912_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10586..11458)
DNA (873bp) protein (291aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Sulfide dehydrogenase (Flavoprotein) subunit SudB {ECO:0000313|EMBL:CBK97083.1}; EC=1.18.1.2 {ECO:0000313|EMBL:CBK97083.1};; EC=1.97.-.- {ECO:0000313|EMBL:CBK97083.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=2 Tax=root RepID=D4JVG4_9FIRM
L2_047_000M1_scaffold_912_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11774..12889
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVG3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97082.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_912_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13115..14020
DNA (906bp) protein (302aa)
Predicted transcriptional regulators n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVG1_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK97080.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_912_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14128..15612
DNA (1485bp) protein (495aa)
Peptidase, M20/M25/M40 family {ECO:0000313|EMBL:EDS01423.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDS01423.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Peptidase, M20/M25/M40 family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLS4_9FIRM
hypothetical protein
L2_047_000M1_scaffold_912_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16405..17484
DNA (1080bp) protein (360aa)
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000313|EMBL:CBK97079.1}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000313|EMBL:CBK97079.1};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Phosphoserine aminotransferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVG0_9FIRM
L2_047_000M1_scaffold_912_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17517..18680
DNA (1164bp) protein (388aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
Phosphoglycerate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CBK97078.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CBK97078.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Phosphoglycerate dehydrogenase and related dehydrogenases n=2 Tax=Eubacterium RepID=D4JVF9_9FIRM
L2_047_000M1_scaffold_912_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19352..19663
DNA (312bp) protein (104aa)
Transcriptional regulator, PadR family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVF8_9FIRM
transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CBK97077.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_912_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19680..20306
DNA (627bp) protein (209aa)
Predicted membrane protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVF7_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK97076.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_912_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20306..21295
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVF6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97075.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_912_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21448..21855
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01064.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L2_047_000M1_scaffold_912_17
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21884..22345
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6S1G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC49176.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_912_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22551..22907
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=B0MMI3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33419.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_912_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23153..23269
DNA (117bp) protein (39aa)
Transcriptional regulator n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI35_9FIRM
transcriptional regulator
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:EDS01068.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Displaying 19 items

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