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L2_047_000M1_scaffold_1319

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1319_1
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(283..1275)
DNA (993bp) protein (331aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RYU8_9FIRM
L2_047_000M1_scaffold_1319_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1294..1950)
DNA (657bp) protein (219aa)
Glycerol-3-phosphate acyltransferase n=4 Tax=Eubacterium RepID=D4JSE7_9FIRM
conserved hypothetical integral membrane protein TIGR00023
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1319_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1957..3276)
DNA (1320bp) protein (440aa)
GTPase Der n=4 Tax=root RepID=D4JSE6_9FIRM
ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_1319_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3294..4463)
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSE5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96014.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1319_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4460..5797)
DNA (1338bp) protein (446aa)
Putative FeS-containing Cyanobacterial-specific oxidoreductase n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJY7_9FIRM
Putative FeS-containing Cyanobacterial-specific oxidoreductase {ECO:0000313|EMBL:EDS01976.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L2_047_000M1_scaffold_1319_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5932..8259)
DNA (2328bp) protein (776aa)
Bacterial membrane protein YfhO n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RKG8_9FIRM
Bacterial membrane protein YfhO {ECO:0000313|EMBL:CDC48250.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Bacterial membrane protein YfhO.
L2_047_000M1_scaffold_1319_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8337..8522)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=2 Tax=Eubacterium RepID=B0MK01_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
50S ribosomal protein L32
L2_047_000M1_scaffold_1319_8
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8629..9036)
DNA (408bp) protein (136aa)
Uncharacterized protein n=5 Tax=root RepID=B0MK02_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC48246.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_1319_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9149..10486)
DNA (1338bp) protein (446aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glucose-6-phosphate isomerase n=5 Tax=root RepID=D4JSE2_9FIRM
L2_047_000M1_scaffold_1319_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10992..11099
DNA (108bp) protein (36aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSE1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96010.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1319_11

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11089..12222
DNA (1134bp) protein (378aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RY64_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC48154.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_047_000M1_scaffold_1319_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12224..13522
DNA (1299bp) protein (433aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSE0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96009.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1319_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13519..14208
DNA (690bp) protein (230aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSD9_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK96008.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1319_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14265..15434)
DNA (1170bp) protein (390aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBK96007.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBK96007.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSD8_9FIRM
L2_047_000M1_scaffold_1319_15
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15559..15996
DNA (438bp) protein (146aa)
Predicted membrane protein n=4 Tax=Eubacterium RepID=D4JSD7_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CDC48240.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_1319_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17027..17854
DNA (828bp) protein (276aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSD5_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBK96004.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1319_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18012..19385
DNA (1374bp) protein (458aa)
Beta-mannanase (EC:3.2.1.78)
Beta-mannanase {ECO:0000313|EMBL:CBK96003.1}; EC=3.2.1.78 {ECO:0000313|EMBL:CBK96003.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Beta-mannanase n=2 Tax=root RepID=D4JSD4_9FIRM
L2_047_000M1_scaffold_1319_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19402..20259
DNA (858bp) protein (286aa)
Galactose mutarotase and related enzymes n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSD3_9FIRM
Galactose mutarotase and related enzymes
Galactose mutarotase and related enzymes {ECO:0000313|EMBL:CBK96002.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1319_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20504..21355)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSD2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96001.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1319_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21822..22388
DNA (567bp) protein (189aa)
Elongation factor P n=4 Tax=Eubacterium RepID=D4JSD1_9FIRM
translation elongation factor P (EF-P)
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L2_047_000M1_scaffold_1319_21
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22442..22891
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6RH82_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC48228.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_1319_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23250..24074
DNA (825bp) protein (275aa)
Nucleotide-binding protein n=3 Tax=root RepID=B0MK04_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:EDS01993.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
ATPases involved in chromosome partitioning
L2_047_000M1_scaffold_1319_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24204..25169
DNA (966bp) protein (322aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSC9_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1319_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25172..26434
DNA (1263bp) protein (421aa)
Chloride channel protein EriC n=2 Tax=root RepID=D4JSC8_9FIRM
Chloride channel protein EriC
Chloride channel protein EriC {ECO:0000313|EMBL:CBK95997.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1319_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26609..29236
DNA (2628bp) protein (876aa)
Methyl-accepting chemotaxis protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSC7_9FIRM
Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBK95996.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Displaying 25 items

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