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L2_047_000M1_scaffold_545_29

Organism: dasL2_047_000M1_concoct_38_fa

near complete RP 46 / 55 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 33703..37218

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 1171.0
  • Bit_score: 2301
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 1171.0
  • Bit_score: 2301
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVX9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 1171.0
  • Bit_score: 2301
  • Evalue 0.0

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Taxonomy

[Eubacterium] siraeum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3516
ATGGAACTTCTTAAAAATATGGCTGACACGCTGACCGAGTACAAAAAGTCAGTCGCACATATTTTAAGCGATGAACCCGTGCCCTTACTGGTCACGGGGCTTTCGCATATACAAAAGGCACACTTCCTGGCGGCCTTATGCTACGAAAAGCTTCCCTCACCGGTACTTGTCATAACCGAGAGCGAGGCATCTGCGGCAAAGCTCACAGAGGATATAAACACAATGTGCGGTGATACTGCCGCATATCAGTTTCCTGCGTCGGATCTGACCCTTGCCGATACTGAGGCACAGTCGCAGGAGTACGAGTATAAGCGTATCGAAACGCTGTCTGCAGCGCTTTCGGGCAAGGCAAGGCTGATAATATCCTCGTCTGAAGCGGCGGTACAGCTTACCGTTCCCAAAGACGTACTGGAAAAGCACACCGTTACGCTTAAAGCAGGCGATGAGATAAAGCTCGACGAGCTTGCAAAGACGCTTGTCAGCGCAGGCTATACACGCTGTGATATGATAGAGGGTAAGGGACAGTTCTCGTTCAGAGGCTCGCTTGCCGACATTTACCCTGTCAGCAGTGATTATCCTGTCAGGATAGAGCTGTGGGGCGATGAAATCGACACGGTGGCTTCATTCGACCTTGATACGCAAAGAAGAATAGATACGGTAAAGAGTGTCAGCATAACACCCTGCGGAGAAACGATTTTCGAGGAGGGCGTTCTTTCGGGGACGCTGCAGACGCTTCTTGAAAAGACCGAAAAGAACAAAAAGAAGAACGATGAAGCGGCAAAGCGTATAAGACGTGATATAGCAAGACTGCGTGACGGTATTTCCGTATGCTGTCTTAACCGTTATTTTCCGCTTTGCTATAAAGAGCCGGGCAGTATTTTTGATTATGCGTCCACTCTTATAGTCAGCGAATCCTTTACTGCGTCAGAGGCGGCAAAGGGAGCTATCTCGGCTCACCTTGAGGATCTTAAGCTGCTTACCGAGGACGGAGTTCTGTGCAAGGGACTTGACAGGTACCTGATGAGCAAAGCAGAATATCAGGACACGGTAAAGAATAATGTGCGGCTTTATATGGATACGTTCATAAGAGGCGGAGGAATCGACCTCAGCGATATTCTGAAGGTGGATTCGATACAGCTTTCCGCATGGAGCGGAGAGTATAAAATGCTTTTCGAGGAGCTTGACAATTACAGCAGGAACGGCTATTCCTGCGTGATTTTCGGCGGCACGGACAAAGCGGCAAAGATACTTGCGGAGGATCTGCACGATAAAGGCTACAAGGCTGATTATGCCAAAAACCCGAAGAAATTCTACCTCGGCAGAATTACGGTAGTCGAGGGAATATTATCGGCAGGCTTTGAATATCCGGAAGAAAAAATAGCCGTACTCACCCGTACAAGCGCTTCATCATCAAAAACCTCTACACCTAAGAAGAAATTCAAAAAGGGCGCACAGATACGTTCGCTCAGCGATATTTCTCAGGGAGATCTTGTGGTACACGGCTCATACGGTATAGGCGTATTCGAGGGCGTTCAGAAGCTCACAGCAGACAAGGTTTCAAAGGATTATATAAAGATAAAATACGCAGGTACGGATGTGCTTTATGTTCCCGTTACCCAGCTTGACCTCATTTCACGTTATATAGGAAGCGGAGATGCGGATACGGTAAGGCTGAACAAGCTTGGCACAGATACCTGGAAAAAGGCAAAGACAAAGGCAAAAGCGGCAACACAGGAGATGGCGAAGGAGCTTATCGAGCTGTATTCACGCCGTATGAAAGCAAAGGGATTTGCATTCTCCCCCGATACCGAGCAGCAGCATATATTCGAGGATCATTTCAGCTATGTTGAAACGGACGATCAGCTCCGCTGTATAGAGGAAATAAAGCACGATATGATGCGTACCGCCCCTATGGAGAGACTTCTCTGCGGAGATGTAGGATTCGGAAAGACGGAGGTCGCACTCCGTGCCGCATTCAAGTGTATAGGTGACGGTAAGCAGTGCGCTATACTTGTGCCGACTACCGTTCTTGCGTGGCAGCACTACCAGACGGTTTTAAAACGTATGGAGGGCTTTGATATAAGAGTTGAGCTGTTGTCACGTTTCCGCACAGCAAAGGAACAGAAGATAATTCTGAAGAAGCTGGAAGAAGGCGAGCTTGACCTTGTAGTAGGCACACACAGGCTTGTGCAGGACGATGTTAAGTTCAAGGATTTAGGACTTGTTATTATAGACGAAGAACAGCGTTTCGGCGTAAACGATAAGGAAAAGCTGAAAGAAGCGTTCACAAACGTAGATGTTCTGACGTTATCTGCAACCCCCATTCCCAGAACGCTAAATATGGCGATGTCTGGAATAAGGGATATGAGTGTCATTGAAACTCCGCCCGGCGACCGTCACCCGATAACCACATACGTTGTCGAGCACGACAGAGGAGTTATAGCGCAGGCGATAAATAAGGAGCTTCGCCGCAACGGACAGGTTTACTATGTCCACAACCGCATTGAAAGCATATATTCCTGCGCCGCAGATATTCATTCTATGGTACCCGAAGCAAATATCGGAATTGCACACGGAAGAATGAGCGAGGAAGAGCTTCTCGATGTATGGAGAAGGCTTATCGAAGGCGAGATAGATGTGCTTGTCTGCACAACGCTTATCGAAACCGGTGTAGATGTACCTAACTGCAACACGCTTATCATTGAGAATGCGGATTGTATGGGACTTGCCCAGCTCCACCAGCTCAGAGGCCGTGTCGGACGTACAAACCGCCGTGCATATGCATATTTCACTTTCAGACGGGGCAAGGTGCTCAGCGAGATTGCCACCAAGCGACTTGACGCAATAAGAGAGTTTACACGCTTCGGTTCGGGATTCAGGATAGCTATGAAAGACCTTGAAATAAGAGGCGCAGGCTCGGTTCTCGGTCAGAGCCAGTCGGGACATCTTGCGTCTGTCGGCTATGATATGTATATAAAACTGCTCAACGAGGCGATTTTAGAACAGCAGGGCAAAGCCCCCGAAATTACTCCGGAGTGCCTTATTGATATAAGAATTGATGCGTTTATCCCCGAAAAGTATATCTCTAATCAGGCACAGCGTGTTGACTGCTACAGAAAGATAGCGATGATAGAAAATGACGAGGACGCTTATGATGTGACCGATGAGCTTATTGACCGTTACGGCGATGTGCCGAGAGCGGTCGAGGGACTTATTGAGGTTGCAAAGCTGAGAAGGATTGCTCAGAAGATGCACCTGACCGAAATAATCCAGAGCGGCGACGTTATGATATTCTATCCCGAAAAGACCGATAAGAAAACGATGGAACGTGTTTCGGCGGTAGGAGGAAAATTCGGCAAGGATATGATGCTGAACATTGCCACCGACAAGCCTAACTTCCGTGTAAACGGCACGGATAAACACGGCGGACCGCTTGCACTGCTTGCAGATACACTTGCGGCAATGCAGTCTATTGATAAAGAGAATGTGACCGAAGAAGGTGAGAATAATGGCTGA
PROTEIN sequence
Length: 1172
MELLKNMADTLTEYKKSVAHILSDEPVPLLVTGLSHIQKAHFLAALCYEKLPSPVLVITESEASAAKLTEDINTMCGDTAAYQFPASDLTLADTEAQSQEYEYKRIETLSAALSGKARLIISSSEAAVQLTVPKDVLEKHTVTLKAGDEIKLDELAKTLVSAGYTRCDMIEGKGQFSFRGSLADIYPVSSDYPVRIELWGDEIDTVASFDLDTQRRIDTVKSVSITPCGETIFEEGVLSGTLQTLLEKTEKNKKKNDEAAKRIRRDIARLRDGISVCCLNRYFPLCYKEPGSIFDYASTLIVSESFTASEAAKGAISAHLEDLKLLTEDGVLCKGLDRYLMSKAEYQDTVKNNVRLYMDTFIRGGGIDLSDILKVDSIQLSAWSGEYKMLFEELDNYSRNGYSCVIFGGTDKAAKILAEDLHDKGYKADYAKNPKKFYLGRITVVEGILSAGFEYPEEKIAVLTRTSASSSKTSTPKKKFKKGAQIRSLSDISQGDLVVHGSYGIGVFEGVQKLTADKVSKDYIKIKYAGTDVLYVPVTQLDLISRYIGSGDADTVRLNKLGTDTWKKAKTKAKAATQEMAKELIELYSRRMKAKGFAFSPDTEQQHIFEDHFSYVETDDQLRCIEEIKHDMMRTAPMERLLCGDVGFGKTEVALRAAFKCIGDGKQCAILVPTTVLAWQHYQTVLKRMEGFDIRVELLSRFRTAKEQKIILKKLEEGELDLVVGTHRLVQDDVKFKDLGLVIIDEEQRFGVNDKEKLKEAFTNVDVLTLSATPIPRTLNMAMSGIRDMSVIETPPGDRHPITTYVVEHDRGVIAQAINKELRRNGQVYYVHNRIESIYSCAADIHSMVPEANIGIAHGRMSEEELLDVWRRLIEGEIDVLVCTTLIETGVDVPNCNTLIIENADCMGLAQLHQLRGRVGRTNRRAYAYFTFRRGKVLSEIATKRLDAIREFTRFGSGFRIAMKDLEIRGAGSVLGQSQSGHLASVGYDMYIKLLNEAILEQQGKAPEITPECLIDIRIDAFIPEKYISNQAQRVDCYRKIAMIENDEDAYDVTDELIDRYGDVPRAVEGLIEVAKLRRIAQKMHLTEIIQSGDVMIFYPEKTDKKTMERVSAVGGKFGKDMMLNIATDKPNFRVNGTDKHGGPLALLADTLAAMQSIDKENVTEEGENNG*