ggKbase home page

L2_047_000M1_scaffold_1208_7

Organism: dasL2_047_000M1_concoct_38_fa

near complete RP 46 / 55 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(9072..9632)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JX39_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 374
  • Evalue 3.50e-101
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 374
  • Evalue 1.00e-101
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBK97658.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 374
  • Evalue 4.90e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Eubacterium] siraeum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 561
ATGGGCGCAGAGATTCACGGAGGTCACGAGAATAACGAAGAATATTTCAACCGTGTCTACAACGAAACCTGCAGATCCGTTTCCCGTTTTGTAGTCAGCAAATGCGGAAACAGAGAAGATGCGGAAGATATTATTCAGAACGTCTATACACGTTTCTTCAAGCGCATAAGCGAAAAAGGACACGAGGACATCGAAAGCCCCGAGGCTTTCCTTATAAATATAGCGAAGTTTGAATGCCGCACCTATTTTTCGGGCAGGAAGAAGGATGACAAGGTTTCCTCCTTTTCCGACTATACCGAAGAAGAAATGGTCGCTATCGAACGGGAGATGTCCAAGCCTCAGCAACGGCTTGAGGATGTTATCAGCAACAAGATTGTTGCAAAGCAGATTTTCGATGACATAATGAAGACCGATGAACTGACAGGTCAGATATTCTATCTTCATTTTGCGTGCGATATGAAGCTGGAGGATGTAGCGAAGGCGCTTGACGTCAAGCTGTCTACCGTTAAAAACAAGCTCTATCGCACAATAGAAAGACAAAAGAAAAAATTCAAATTATAA
PROTEIN sequence
Length: 187
MGAEIHGGHENNEEYFNRVYNETCRSVSRFVVSKCGNREDAEDIIQNVYTRFFKRISEKGHEDIESPEAFLINIAKFECRTYFSGRKKDDKVSSFSDYTEEEMVAIEREMSKPQQRLEDVISNKIVAKQIFDDIMKTDELTGQIFYLHFACDMKLEDVAKALDVKLSTVKNKLYRTIERQKKKFKL*