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L2_047_000M1_scaffold_1208

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1208_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(332..3787)
DNA (3456bp) protein (1152aa)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MNG8_9FIRM
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CBL35301.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Beta-galactosidase/beta-glucuronidase
L2_047_000M1_scaffold_1208_2
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4152..4868)
DNA (717bp) protein (239aa)
NlpC/P60 family protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SS06_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:CDC49397.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L2_047_000M1_scaffold_1208_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5101..5709)
DNA (609bp) protein (203aa)
Cell wall-associated hydrolases (Invasion-associated proteins) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JX42_9FIRM
Cell wall-associated hydrolases (invasion-associated proteins)
Cell wall-associated hydrolases (Invasion-associated proteins) {ECO:0000313|EMBL:CBK97661.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1208_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6468..6701)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=root RepID=K1U058_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97660.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1208_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6806..8242)
DNA (1437bp) protein (479aa)
Endoglucanase A n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RRB0_9FIRM
Endoglucanase A {ECO:0000313|EMBL:CDC45581.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Endoglucanase
L2_047_000M1_scaffold_1208_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8364..9047)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JX40_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97659.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1208_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9072..9632)
DNA (561bp) protein (187aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JX39_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBK97658.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1208_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10177..11361
DNA (1185bp) protein (395aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JX38_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97657.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1208_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11622..13262
DNA (1641bp) protein (547aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JX37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBK97656.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
hypothetical protein
L2_047_000M1_scaffold_1208_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13817..14365)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=root RepID=R6R9M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45603.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L2_047_000M1_scaffold_1208_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14387..15205)
DNA (819bp) protein (273aa)
ATPases involved in chromosome partitioning n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JX36_9FIRM
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBK97655.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1208_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15321..17333)
DNA (2013bp) protein (671aa)
Diguanylate cyclase (GGDEF) domain protein n=2 Tax=root PF5_9FIRM">RepID=B0MPF5_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDS00545.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain
L2_047_000M1_scaffold_1208_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17402..18100)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Eubacterium siraeum RepID=UPI000377BE42
Type IV pilus assembly protein PilZ {ECO:0000313|EMBL:EDS00544.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
type IV pilus assembly PilZ
L2_047_000M1_scaffold_1208_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18399..19124
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JX34_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97653.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1208_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19461..19844
DNA (384bp) protein (128aa)
Flagellar basal body rod protein FlgB n=5 Tax=root RepID=D4JX33_9FIRM
flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_1208_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20108..20590
DNA (483bp) protein (161aa)
Flagellar basal-body rod protein FlgC n=3 Tax=root RepID=D4JX32_9FIRM
flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1208_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20616..20921
DNA (306bp) protein (102aa)
Flagellar hook-basal body complex protein FliE n=2 Tax=root RepID=D4JX31_9FIRM
flagellar hook-basal body complex protein FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1208_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20963..22591
DNA (1629bp) protein (543aa)
Flagellar basal-body M-ring protein/flagellar hook-basal body protein (FliF) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JX30_9FIRM
Flagellar basal-body M-ring protein/flagellar hook-basal body protein (FliF) {ECO:0000313|EMBL:CBK97649.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
L2_047_000M1_scaffold_1208_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22619..23623
DNA (1005bp) protein (335aa)
Flagellar motor switch protein FliG n=4 Tax=root RepID=D4JX29_9FIRM
flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000313|EMBL:CBK97648.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_047_000M1_scaffold_1208_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23645..24583
DNA (939bp) protein (313aa)
Putative ATP synthase F1, delta subunit n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPE7_9FIRM
Putative ATP synthase F1, delta subunit {ECO:0000313|EMBL:EDS00537.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
flagellar assembly protein FliH/Type III secretion system HrpE
L2_047_000M1_scaffold_1208_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24609..25913
DNA (1305bp) protein (435aa)
type III secretion system ATPase, FliI/YscN (EC:3.6.3.14 3.6.3.15)
Type III secretion system ATPase, FliI/YscN {ECO:0000313|EMBL:CBK97647.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CBK97647.1};; EC=3.6.3.15 {ECO:0000313|EMBL:CBK97647.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Type III secretion system ATPase, FliI/YscN n=5 Tax=root RepID=D4JX28_9FIRM
L2_047_000M1_scaffold_1208_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25926..26378
DNA (453bp) protein (151aa)
Flagellar export protein FliJ n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MNI6_9FIRM
flagellar export protein FliJ
Flagellar export protein FliJ {ECO:0000313|EMBL:CBL35319.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_1208_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26533..28041
DNA (1509bp) protein (503aa)
Flagellar hook-length control protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPE4_9FIRM
Flagellar hook-length control protein {ECO:0000313|EMBL:EDS00534.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Flagellar hook-length control protein
L2_047_000M1_scaffold_1208_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28077..28751
DNA (675bp) protein (225aa)
Flagellar hook capping protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPE3_9FIRM
Flagellar hook capping protein {ECO:0000313|EMBL:EDS00533.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Flagellar hook capping protein
L2_047_000M1_scaffold_1208_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28771..29175
DNA (405bp) protein (135aa)
Flagellar operon protein n=3 Tax=Eubacterium siraeum RepID=D4JX24_9FIRM
flagellar operon protein
Flagellar operon protein {ECO:0000313|EMBL:CBL35321.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_000M1_scaffold_1208_26
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29257..30822
DNA (1566bp) protein (522aa)
Flagellar hook-basal body protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RRF3_9FIRM
Flagellar hook-basal body protein {ECO:0000313|EMBL:CDC45636.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
fagellar hook-basal body proteins
Displaying 26 items

View Taxonomy