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L2_047_000M1_scaffold_2622

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_2622_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..539)
DNA (537bp) protein (179aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDU1_9CLOT
tRNA (guanine-N1-)-methyltransferase
L2_047_000M1_scaffold_2622_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(529..1056)
DNA (528bp) protein (176aa)
Ribosome maturation factor RimM n=1 Tax=Clostridium sp. CAG:226 RepID=R5B206_9CLOT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rimM; 16S rRNA-processing protein RimM
L2_047_000M1_scaffold_2622_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1058..1285)
DNA (228bp) protein (76aa)
UPF0109 protein BN545_01014 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5W8_9CLOT
UPF0109 protein BN545_01014 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein UPF0109
L2_047_000M1_scaffold_2622_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1312..1554)
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2U0_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
30S ribosomal protein S16
L2_047_000M1_scaffold_2622_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1632..2975)
DNA (1344bp) protein (448aa)
Signal recognition particle protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9N9_9CLOT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
signal recognition particle subunit FFH/SRP54 (srp54)
L2_047_000M1_scaffold_2622_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2965..3297)
DNA (333bp) protein (111aa)
UPF0122 protein BN545_01011 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDT9_9CLOT
UPF0122 protein BN545_01011 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L2_047_000M1_scaffold_2622_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3406..3876)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B203_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49570.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L2_047_000M1_scaffold_2622_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3878..4783)
DNA (906bp) protein (302aa)
Signal recognition particle receptor FtsY n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5W3_9CLOT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
signal recognition particle-docking protein FtsY
L2_047_000M1_scaffold_2622_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4793..8350)
DNA (3558bp) protein (1186aa)
Chromosome partition protein Smc n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2T6_9CLOT
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
chromosome segregation protein SMC
L2_047_000M1_scaffold_2622_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8347..8706)
DNA (360bp) protein (120aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Ribonuclease 3 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9N4_9CLOT
rnc; ribonuclease III
Displaying 10 items

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