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L2_047_000M1_scaffold_3391

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_3391_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..539)
DNA (537bp) protein (179aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2W1_9CLOT
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX49603.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L2_047_000M1_scaffold_3391_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(553..1509)
DNA (957bp) protein (319aa)
ABC-type transporter integral membrane subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7F9_9CLOT
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CCX51238.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter permease
L2_047_000M1_scaffold_3391_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1526..2470)
DNA (945bp) protein (315aa)
ABC-type transporter integral membrane subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEF8_9CLOT
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CCX51237.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter permease
L2_047_000M1_scaffold_3391_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2593..4557)
DNA (1965bp) protein (655aa)
Oligopeptide-binding protein aliB n=1 Tax=Clostridium sp. CAG:226 RepID=R5BIF8_9CLOT
Oligopeptide-binding protein aliB {ECO:0000313|EMBL:CCX51236.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
aliB; oligopeptide ABC transporter periplasmic protein
L2_047_000M1_scaffold_3391_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4777..5655
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6L3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51235.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
RpiR family transcriptional regulator
L2_047_000M1_scaffold_3391_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5681..6838
DNA (1158bp) protein (386aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
isoaspartyl dipeptidase IadA (EC:3.4.19.5)
Isoaspartyl dipeptidase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAC8_9CLOT
L2_047_000M1_scaffold_3391_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7197..8501)
DNA (1305bp) protein (435aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
M18 family aminopeptidase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BI83_9CLOT
peptidase M18
L2_047_000M1_scaffold_3391_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8739..9182)
DNA (444bp) protein (148aa)
Chaperone Hsp20 family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6F2_9CLOT
Chaperone Hsp20 family {ECO:0000313|EMBL:CCX51150.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Molecular chaperone (small heat shock protein)
L2_047_000M1_scaffold_3391_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9346..10644)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BA60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51149.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L2_047_000M1_scaffold_3391_10
unknown

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comp(10680..10814)
DNA (135bp) protein (45aa)

This feature has no annotations

L2_047_000M1_scaffold_3391_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11114..11458
DNA (345bp) protein (115aa)
Sporulation transcription regulator Spo0A n=1 Tax=Clostridium sp. CAG:226 RepID=R5B793_9CLOT
Sporulation transcription regulator Spo0A {ECO:0000313|EMBL:CCX51148.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L2_047_000M1_scaffold_3391_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11497..12015)
DNA (519bp) protein (173aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase CwlD n=1 Tax=Clostridium sp. CAG:226 RepID=R5BE71_9CLOT
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:CCX51147.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L2_047_000M1_scaffold_3391_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12757..13230
DNA (474bp) protein (158aa)
Transcriptional regulator CarD family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6E8_9CLOT
Transcriptional regulator CarD family {ECO:0000313|EMBL:CCX51145.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
CarD family transcriptional regulator
L2_047_000M1_scaffold_3391_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13326..14393
DNA (1068bp) protein (356aa)
PilT protein domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BA55_9CLOT
PilT protein domain protein {ECO:0000313|EMBL:CCX51144.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
PilT protein domain-containing protein
Displaying 14 items

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