ggKbase home page

L2_047_000M1_scaffold_4874

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_4874_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6..374)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEQ1_9CLOT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rplR; 50S ribosomal protein L18
L2_047_000M1_scaffold_4874_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(398..937)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAL3_9CLOT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rplF; 50S ribosomal subunit protein L6
L2_047_000M1_scaffold_4874_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(968..1366)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3M5_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
30S ribosomal protein S8
L2_047_000M1_scaffold_4874_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1393..1578)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6P4_9CLOT
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Ribosomal protein S14
L2_047_000M1_scaffold_4874_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1597..2217)
DNA (621bp) protein (207aa)
50S ribosomal protein L5 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2T1_9CLOT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rplE; 50S ribosomal protein L5
L2_047_000M1_scaffold_4874_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2235..2552)
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEQ5_9CLOT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
50S ribosomal protein L24
L2_047_000M1_scaffold_4874_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2598..2900)
DNA (303bp) protein (101aa)
50S ribosomal protein L14 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAL9_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
50S ribosomal protein L14
L2_047_000M1_scaffold_4874_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2919..3182)
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3M9_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rpsQ; 30S ribosomal protein S17
L2_047_000M1_scaffold_4874_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3204..3404)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6P9_9CLOT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
50S ribosomal protein L29
L2_047_000M1_scaffold_4874_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3394..3831)
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2T5_9CLOT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rplP; 50S ribosomal protein L16
L2_047_000M1_scaffold_4874_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3847..4344)
DNA (498bp) protein (166aa)
30S ribosomal protein S3 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BER1_9CLOT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
30S ribosomal protein S3
L2_047_000M1_scaffold_4874_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4355..4741)
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAM5_9CLOT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
50S ribosomal protein L22
L2_047_000M1_scaffold_4874_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4755..5036)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3N6_9CLOT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
30S ribosomal protein S19
L2_047_000M1_scaffold_4874_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5056..5889)
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6Q6_9CLOT
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rplB; 50S ribosomal protein L2
L2_047_000M1_scaffold_4874_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5901..6197)
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2T9_9CLOT
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rplW; 50S ribosomal protein L23
L2_047_000M1_scaffold_4874_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6197..6817)
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BER6_9CLOT
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rplD; 50S ribosomal protein L4
L2_047_000M1_scaffold_4874_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6837..7463)
DNA (627bp) protein (209aa)
50S ribosomal protein L3 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAN1_9CLOT
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
50S ribosomal protein L3, bacterial
L2_047_000M1_scaffold_4874_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7483..7791)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3P1_9CLOT
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
30S ribosomal protein S10
L2_047_000M1_scaffold_4874_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8178..9035
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6R2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49914.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L2_047_000M1_scaffold_4874_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9394..9798)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49915.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L2_047_000M1_scaffold_4874_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9811..10263)
DNA (453bp) protein (151aa)
Ankyrin repeat protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BES3_9CLOT
Ankyrin repeat protein {ECO:0000313|EMBL:CCX49916.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L2_047_000M1_scaffold_4874_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10433..10612
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49917.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L2_047_000M1_scaffold_4874_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10659..12023)
DNA (1365bp) protein (455aa)
Aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde dehydrogenase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3P9_9CLOT
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L2_047_000M1_scaffold_4874_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12104..13207)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6R6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49919.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L2_047_000M1_scaffold_4874_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13223..13693)
DNA (471bp) protein (157aa)
MBOAT family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2V1_9CLOT
MBOAT family protein {ECO:0000313|EMBL:CCX49920.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Predicted membrane protein involved in D-alanine export
Displaying 25 items

View Taxonomy