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L2_047_000M1_scaffold_104

Search features with annotation key words

Displaying items 1-30 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_104_1
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(325..1683)
DNA (1359bp) protein (453aa)
DNA repair protein radA n=1 Tax=Clostridium sp. CAG:127 RepID=R5NZ49_9CLOT
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
DNA repair protein RadA
L2_047_000M1_scaffold_104_2
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1768..2181)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NXY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09070.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_047_000M1_scaffold_104_3
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2309..4744)
DNA (2436bp) protein (812aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium sp. CAG:127 RepID=R5PJH9_9CLOT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CCZ09072.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
ATPase
L2_047_000M1_scaffold_104_4
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4741..5142)
DNA (402bp) protein (134aa)
Transcriptional regulator GntR family n=1 Tax=Clostridium sp. CAG:127 RepID=R5P454_9CLOT
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCZ09074.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
transcriptional regulator, GntR family
L2_047_000M1_scaffold_104_5
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5161..6432)
DNA (1272bp) protein (424aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridium sp. CAG:127 RepID=R5NXY5_9CLOT
L2_047_000M1_scaffold_104_6
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6460..7053)
DNA (594bp) protein (198aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Clostridium sp. CAG:127 RepID=R5PJI4_9CLOT
L2_047_000M1_scaffold_104_7
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7047..8072)
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridium sp. CAG:127 RepID=R5P458_9CLOT
L2_047_000M1_scaffold_104_8
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8302..10617
DNA (2316bp) protein (772aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PGP0_9CLOT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CCZ09081.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Transcriptional regulators
L2_047_000M1_scaffold_104_9
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10614..11468)
DNA (855bp) protein (285aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Clostridium sp. CAG:127 RepID=R5NZ57_9CLOT
L2_047_000M1_scaffold_104_10
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11490..11921)
DNA (432bp) protein (144aa)
Putative acyl-CoA thioesterase n=1 Tax=Clostridium sp. CAG:127 RepID=R5NXZ2_9CLOT
Putative acyl-CoA thioesterase {ECO:0000313|EMBL:CCZ09085.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
conserved hypothetical protein TIGR00051
L2_047_000M1_scaffold_104_11
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11918..12613)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PJJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09087.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_047_000M1_scaffold_104_12
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12693..13538)
DNA (846bp) protein (282aa)
Signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Clostridium sp. CAG:127 RepID=R5P465_9CLOT
Signal transduction histidine kinase regulating citrate/malate metabolism {ECO:0000313|EMBL:CCZ09089.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
signal transduction histidine kinase regulating citrate/malate metabolism
L2_047_000M1_scaffold_104_13
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13525..14265)
DNA (741bp) protein (247aa)
Response regulator of the LytR/AlgR family n=1 Tax=Clostridium sp. CAG:127 RepID=R5PGP9_9CLOT
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CCZ09091.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Response regulator of the LytR/AlgR family
L2_047_000M1_scaffold_104_14
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14286..14831)
DNA (546bp) protein (182aa)
Nitroreductase family protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PJJ5_9CLOT
Nitroreductase family protein {ECO:0000313|EMBL:CCZ09092.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Nitroreductase
L2_047_000M1_scaffold_104_15
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15265..16950)
DNA (1686bp) protein (562aa)
Phosphoribulokinase family protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5P468_9CLOT
Phosphoribulokinase family protein {ECO:0000313|EMBL:CCZ09094.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
phosphoribulokinase/uridine kinase
L2_047_000M1_scaffold_104_16
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16975..17748)
DNA (774bp) protein (258aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium sp. CAG:127 RepID=R5PJJ9_9CLOT
hypothetical protein
L2_047_000M1_scaffold_104_17
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17765..18529)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5P471_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09099.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Predicted SAM-dependent methyltransferase
L2_047_000M1_scaffold_104_18
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18516..19706)
DNA (1191bp) protein (397aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:127 RepID=R5P478_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
RNA polymerase, sigma 70 subunit, RpoD
L2_047_000M1_scaffold_104_19
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19739..21550)
DNA (1812bp) protein (604aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Clostridium sp. CAG:127 RepID=R5PGR6_9CLOT
L2_047_000M1_scaffold_104_20
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21596..22603)
DNA (1008bp) protein (336aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Putative dGTPase n=1 Tax=Clostridium sp. L2-50 RepID=A7VCB5_9CLOT
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L2_047_000M1_scaffold_104_21
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22749..23888)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NY20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09130.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
L2_047_000M1_scaffold_104_22
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24041..24922)
DNA (882bp) protein (294aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PGT6_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCZ09131.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
CUT1 family carbohydrate ABC transporter membrane protein 2
L2_047_000M1_scaffold_104_23
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24938..25921)
DNA (984bp) protein (328aa)
ABC-type sugar transport systems permease components n=1 Tax=Clostridium sp. CAG:127 RepID=R5PJM9_9CLOT
ABC-type sugar transport systems permease components {ECO:0000313|EMBL:CCZ09132.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
ABC-type sugar transport systems, permease components
L2_047_000M1_scaffold_104_24
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26112..27515)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NZ99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09133.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
ABC transporter extracellular-binding protein
L2_047_000M1_scaffold_104_25
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27852..28994)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5P490_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09134.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hydrolase
L2_047_000M1_scaffold_104_26
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29162..30073
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NY23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09135.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
L2_047_000M1_scaffold_104_27
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30197..31828)
DNA (1632bp) protein (544aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PGU0_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ09136.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_047_000M1_scaffold_104_28
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31984..32169)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PJN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09137.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_047_000M1_scaffold_104_29
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32237..32767)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NZA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09138.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_047_000M1_scaffold_104_30
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32794..33732)
DNA (939bp) protein (313aa)
Glycosyl transferase group 2 family n=1 Tax=Clostridium sp. CAG:127 RepID=R5P494_9CLOT
Glycosyl transferase group 2 family {ECO:0000313|EMBL:CCZ09139.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Glycosyltransferases involved in cell wall biogenesis
Displaying items 1-30 of 181 in total

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