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L2_047_000M1_scaffold_927

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_927_1
unknown

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comp(1..174)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_047_000M1_scaffold_927_2
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(385..951)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J2L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28445.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
NADPH-dependent FMN reductase
L2_047_000M1_scaffold_927_3
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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1175..1507
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JBD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28447.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
HTH-type transcriptional regulator
L2_047_000M1_scaffold_927_4
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1672..1839)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5K1H1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY58939.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
L2_047_000M1_scaffold_927_5
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1852..3300)
DNA (1449bp) protein (483aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sp. CAG:127 RepID=R5PA92_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCZ06806.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L2_047_000M1_scaffold_927_6
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3304..4080)
DNA (777bp) protein (259aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NXB6_9CLOT
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:CCZ06804.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
gamma-carboxymuconolactone decarboxylase subunit like protein
L2_047_000M1_scaffold_927_7
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4261..6012)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PCX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ06802.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_047_000M1_scaffold_927_8
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6603..7403
DNA (801bp) protein (267aa)
Transcriptional regulator MerR family n=1 Tax=Clostridium sp. CAG:127 RepID=R5NXB1_9CLOT
Transcriptional regulator MerR family {ECO:0000313|EMBL:CCZ06799.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Predicted transcriptional regulators
L2_047_000M1_scaffold_927_9
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7442..7981)
DNA (540bp) protein (180aa)
Isochorismatase family protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PCX2_9CLOT
Isochorismatase family protein {ECO:0000313|EMBL:CCZ06797.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Amidases related to nicotinamidase
L2_047_000M1_scaffold_927_10
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8049..8633)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MZA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76384.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L2_047_000M1_scaffold_927_11
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8750..9040)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NRI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ06795.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_047_000M1_scaffold_927_12
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9172..10413)
DNA (1242bp) protein (414aa)
phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-CoA ligase n=1 Tax=Clostridium sp. CAG:127 RepID=R5NSG6_9CLOT
Phenylacetate-CoA ligase {ECO:0000313|EMBL:CCZ06793.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
L2_047_000M1_scaffold_927_13
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10474..11064)
DNA (591bp) protein (197aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit (EC:1.2.7.8)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases gamma subunit n=1 Tax=Clostridium sp. CAG:510 RepID=R6C324_9CLOT
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases gamma subunit {ECO:0000313|EMBL:CDA67594.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L2_047_000M1_scaffold_927_14
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11061..12872)
DNA (1812bp) protein (604aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
indolepyruvate ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase alpha subunit n=1 Tax=Clostridium sp. CAG:127 RepID=R5P8A2_9CLOT
L2_047_000M1_scaffold_927_15
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13013..14794)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NQH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ06048.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
L2_047_000M1_scaffold_927_16
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14866..15627)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NPE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ06050.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
L2_047_000M1_scaffold_927_17
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15803..17137)
DNA (1335bp) protein (445aa)
Alpha-L-rhamnosidase N-terminal domain protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5P8A5_9CLOT
Alpha-L-rhamnosidase N-terminal domain protein {ECO:0000313|EMBL:CCZ06051.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_047_000M1_scaffold_927_18
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17489..17698
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NQH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ06053.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_047_000M1_scaffold_927_19
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17886..18716
DNA (831bp) protein (277aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. L2-50 RepID=A7VHH1_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDO56680.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
transcriptional regulator, AraC family
L2_047_000M1_scaffold_927_20
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18763..20694)
DNA (1932bp) protein (644aa)
Two-component system sensor histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C7K7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA67406.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L2_047_000M1_scaffold_927_21
unknown

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comp(20709..20891)
DNA (183bp) protein (61aa)

This feature has no annotations

L2_047_000M1_scaffold_927_22
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20984..21391)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NQI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ06063.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Predicted ATPase (AAA+ superfamily)
L2_047_000M1_scaffold_927_23
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21658..21861)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PAT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ06067.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_047_000M1_scaffold_927_24
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22089..22526)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NPG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ06070.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_047_000M1_scaffold_927_25
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22528..23019)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WSA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73518.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
KilA-N domain-containing protein
Displaying 25 items

View Taxonomy