ggKbase home page

L2_047_000M1_scaffold_6485

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_6485_1
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..710
DNA (708bp) protein (236aa)
TraE family protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KT04_OSCVS
TraE family protein
TraE family protein {ECO:0000313|EMBL:BAL00221.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_047_000M1_scaffold_6485_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

734..1471
DNA (738bp) protein (246aa)
BRO family, N-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJU7_9FIRM
BRO family, N-terminal domain protein {ECO:0000313|EMBL:EFB77045.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Prophage antirepressor
L2_047_000M1_scaffold_6485_3
unknown

Not on your lists

1511..2035
DNA (525bp) protein (175aa)

This feature has no annotations

L2_047_000M1_scaffold_6485_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2025..2975
DNA (951bp) protein (317aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
DNA modification methylase (EC:2.1.1.72)
DNA (Cytosine-5-)-methyltransferase n=2 Tax=Oscillibacter RepID=U2R5M5_9FIRM
L2_047_000M1_scaffold_6485_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2972..3919
DNA (948bp) protein (316aa)
Phosphoadenosine phosphosulfate reductase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7D7_9CLOT
Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:EEG52749.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
class V aminotransferase
L2_047_000M1_scaffold_6485_6
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3916..4521
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036B6BE1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00223.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_047_000M1_scaffold_6485_7

Not on your lists

4500..5552
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036B6BE1
Peptidase, M23/M37 family {ECO:0000313|EMBL:EKC77668.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_047_000M1_scaffold_6485_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5574..5831
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C8J0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80338.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_047_000M1_scaffold_6485_9
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5818..6630
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000368A06D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00225.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_047_000M1_scaffold_6485_10

Not on your lists

6627..6833
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1UK66_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC78505.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_047_000M1_scaffold_6485_11
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6914..7177
DNA (264bp) protein (88aa)
Prevent-host-death family protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IKB1_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EET59040.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
prevent-host-death family protein
L2_047_000M1_scaffold_6485_12
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

7170..7472
DNA (303bp) protein (101aa)
Toxin-antitoxin system toxin component RelE family n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HTD3_9FIRM
Toxin-antitoxin system toxin component RelE family {ECO:0000313|EMBL:CDB29147.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
plasmid stabilization system protein
L2_047_000M1_scaffold_6485_13
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7561..9525
DNA (1965bp) protein (655aa)
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
DNA topoisomerase III n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6UA64_ETHHY
DNA topoisomerase III
Displaying 13 items

View Taxonomy