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L2_047_000M1_scaffold_2183

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_2183_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30..776)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25575.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
recombinase
L2_047_000M1_scaffold_2183_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(773..2347)
DNA (1575bp) protein (525aa)
yokA; resolvase YokA (EC:3.1.-.-)
Resolvase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B535_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54120.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_047_000M1_scaffold_2183_3
unknown

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comp(2423..2566)
DNA (144bp) protein (48aa)

This feature has no annotations

L2_047_000M1_scaffold_2183_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3210..3671)
DNA (462bp) protein (154aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMB2_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO21801.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_047_000M1_scaffold_2183_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4135..5439)
DNA (1305bp) protein (435aa)
Transcriptional regulatory protein, C terminal./Bacterial transcriptional activator domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K183_9FIRM
Transcriptional regulatory protein, C terminal./Bacterial transcriptional activator domain.
Transcriptional regulatory protein, C terminal./Bacterial transcriptional activator domain {ECO:0000313|EMBL:CBL00032.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_2183_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5540..5845)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9Z7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06709.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
XRE family transcriptional regulator
L2_047_000M1_scaffold_2183_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6115..6426)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VY67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59495.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L2_047_000M1_scaffold_2183_8
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6844..7623
DNA (780bp) protein (260aa)
Dinitrogenase iron-molybdenum cofactor n=1 Tax=Clostridium sp. CAG:43 RepID=R7A523_9CLOT
Dinitrogenase iron-molybdenum cofactor {ECO:0000313|EMBL:CDD55908.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_047_000M1_scaffold_2183_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7664..8281
DNA (618bp) protein (206aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNI4_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EFQ05228.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L2_047_000M1_scaffold_2183_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8347..8889
DNA (543bp) protein (181aa)
Rubredoxin n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNI3_9FIRM
Rubredoxin {ECO:0000313|EMBL:EFQ05227.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Rubrerythrin
L2_047_000M1_scaffold_2183_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8910..9284
DNA (375bp) protein (125aa)
Putative desulfoferrodoxin n=1 Tax=Clostridium sp. CAG:43 RepID=R7B6U5_9CLOT
Desulfoferrodoxin
Putative desulfoferrodoxin {ECO:0000313|EMBL:CDD59541.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L2_047_000M1_scaffold_2183_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9361..9573
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FTV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93984.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_047_000M1_scaffold_2183_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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9663..9821
DNA (159bp) protein (53aa)
Rubredoxin (EC:1.18.1.1)
Rubredoxin n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRU1_9FIRM
Rubredoxin {ECO:0000256|RuleBase:RU003820, ECO:0000313|EMBL:CBL40516.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_047_000M1_scaffold_2183_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9989..10279
DNA (291bp) protein (97aa)
4Fe-4S binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNI0_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFQ05224.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
4Fe-4S ferredoxin, iron-sulfur binding
Displaying 14 items

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