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L2_047_000M1_scaffold_199

Search features with annotation key words

Displaying items 1-30 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_199_1
unknown

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comp(219..461)
DNA (243bp) protein (81aa)

This feature has no annotations

L2_047_000M1_scaffold_199_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(747..1049)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25740.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Putative barnase inhibitor
L2_047_000M1_scaffold_199_3
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1063..1449)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Paenibacillus RepID=UPI0003105E2F
hypothetical protein
Ribonuclease {ECO:0000313|EMBL:KJK31585.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polymyxa).;"
L2_047_000M1_scaffold_199_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


comp(1663..1914)
DNA (252bp) protein (84aa)
30S ribosomal protein S18 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D9G6_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rpsR; 30S ribosomal protein S18
L2_047_000M1_scaffold_199_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1961..2395)
DNA (435bp) protein (145aa)
Single-stranded DNA-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTK3_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ssb; single-stranded DNA-binding protein
L2_047_000M1_scaffold_199_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2409..2705)
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2N8_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rpsF; 30S ribosomal protein S6
L2_047_000M1_scaffold_199_7
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

3022..3525
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D9R0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72591.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_199_8
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(3627..3860)
DNA (234bp) protein (78aa)
FeoA domain protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYN8_9FIRM
FeoA domain protein {ECO:0000313|EMBL:CCZ45913.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
FeoA family protein
L2_047_000M1_scaffold_199_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(3919..4308)
DNA (390bp) protein (130aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DC68_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:CCX74427.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L2_047_000M1_scaffold_199_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(4554..6440)
DNA (1887bp) protein (629aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0T1_9FIRM
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CDA81390.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative ABC transporter permease/ATP-binding protein
L2_047_000M1_scaffold_199_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(6433..8172)
DNA (1740bp) protein (580aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DB26_9FIRM
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CDA81391.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative ABC transporter permease/ATP-binding protein
L2_047_000M1_scaffold_199_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(8169..8627)
DNA (459bp) protein (153aa)
Putative MarR family transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTX3_9FIRM
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:CDA81392.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative MarR family transcriptional regulator
L2_047_000M1_scaffold_199_13
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(9147..10433)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SLI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45797.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative glycosyl hydrolase
L2_047_000M1_scaffold_199_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

10562..12550
DNA (1989bp) protein (663aa)
Ferrous iron transport protein B n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWP8_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:CCX72330.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ferrous iron transport protein B
L2_047_000M1_scaffold_199_15
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(12569..13477)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72543.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_199_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

13835..14116
DNA (282bp) protein (94aa)
Putative sporulation protein YqfC n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUM6_9FIRM
Putative sporulation protein YqfC {ECO:0000313|EMBL:CDA81637.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_199_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

14121..15320
DNA (1200bp) protein (400aa)
Putative stage IV sporulation protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D9M1_9FIRM
Putative stage IV sporulation protein {ECO:0000313|EMBL:CCX72541.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
yqfD; putative stage IV sporulation protein
L2_047_000M1_scaffold_199_18
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

15332..16291
DNA (960bp) protein (320aa)
PhoH-like protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXF8_9FIRM
PhoH-like protein {ECO:0000313|EMBL:CCX72540.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
PhoH-like protein
L2_047_000M1_scaffold_199_19
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

16288..16782
DNA (495bp) protein (165aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Endoribonuclease YbeY n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1C4_9FIRM
hypothetical protein
L2_047_000M1_scaffold_199_20
Clostridium sp. CAG:492, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17031..17681
DNA (651bp) protein (217aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:492 RepID=R5YVJ5_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDA30840.1}; TaxID=1262813 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:492.;"
hypothetical protein
L2_047_000M1_scaffold_199_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17697..18026
DNA (330bp) protein (110aa)
CsaA protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1H5_9FIRM
CsaA protein {ECO:0000313|EMBL:CDB27336.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
export-related chaperone CsaA
L2_047_000M1_scaffold_199_22
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

18080..18982
DNA (903bp) protein (301aa)
GTPase Era n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6S5_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
era; GTP-binding protein Era
L2_047_000M1_scaffold_199_23
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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19457..20215
DNA (759bp) protein (253aa)
DNA repair protein RecO n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D8W7_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
recO; DNA repair protein RecO
L2_047_000M1_scaffold_199_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20670..23057
DNA (2388bp) protein (796aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Endonuclease MutS2 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GSA6_9FIRM
mutS2; MutS2 protein
L2_047_000M1_scaffold_199_25
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23279..23542
DNA (264bp) protein (88aa)
HPr family phosphocarrier n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M5L2_9FIRM
crh; HPr-like protein Crh
HPr family phosphocarrier {ECO:0000313|EMBL:EOS65981.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L2_047_000M1_scaffold_199_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23801..24256
DNA (456bp) protein (152aa)
Ribosome maturation factor RimP n=2 Tax=root RepID=R6HMU7_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_047_000M1_scaffold_199_27
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

24372..25442
DNA (1071bp) protein (357aa)
Transcription elongation protein NusA n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWW7_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
nusA; transcription elongation protein NusA
L2_047_000M1_scaffold_199_28
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

25647..25913
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81380.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_199_29
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

25916..26551
DNA (636bp) protein (212aa)
Ribosomal protein L7Ae n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D959_9FIRM
Ribosomal protein L7Ae {ECO:0000313|EMBL:CCX72386.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_199_30
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

26770..29124
DNA (2355bp) protein (785aa)
Translation initiation factor IF-2 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXX4_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
infB; translation initiation factor IF-2
Displaying items 1-30 of 162 in total

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