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L2_047_000M1_scaffold_271

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_271_1
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..579)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KSZ9_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00216.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_047_000M1_scaffold_271_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(1107..3344)
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IPK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42224.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_271_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(3358..3864)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003671979
Uncharacterized protein {ECO:0000313|EMBL:CCY42226.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_271_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(3958..4578)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036E4091
Uncharacterized protein {ECO:0000313|EMBL:CCY42229.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_271_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(4655..5209)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036125B1
Uncharacterized protein {ECO:0000313|EMBL:CCY42230.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_047_000M1_scaffold_271_6
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5315..5713)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GKB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI54850.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
hypothetical protein
L2_047_000M1_scaffold_271_7
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5803..6078)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CAE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG57580.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_047_000M1_scaffold_271_8

Not on your lists

comp(6084..6758)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1ULB7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC78920.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_047_000M1_scaffold_271_9
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6842..7744)
DNA (903bp) protein (301aa)
Putative chromosome partitioning protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KSZ4_OSCVS
putative chromosome partitioning protein
Putative chromosome partitioning protein {ECO:0000313|EMBL:BAL00211.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_047_000M1_scaffold_271_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7954..9180
DNA (1227bp) protein (409aa)
TnpX site-specific recombinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBT9_9FIRM
TnpX site-specific recombinase {ECO:0000313|EMBL:EDS11064.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
putative site-specific recombinase
L2_047_000M1_scaffold_271_11
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9419..10294
DNA (876bp) protein (292aa)
Recombinase n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5L9_DESAS
recombinase
Recombinase {ECO:0000313|EMBL:ACV64019.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
L2_047_000M1_scaffold_271_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(10613..10891)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D859_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73007.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_271_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(10926..11549)
DNA (624bp) protein (208aa)
Putative RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CYR8_9FIRM
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CCX73008.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative RNA polymerase sigma factor
L2_047_000M1_scaffold_271_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(11621..12970)
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2M7_9FIRM
L2_047_000M1_scaffold_271_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(12993..14033)
DNA (1041bp) protein (347aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9Z0_9FIRM
L2_047_000M1_scaffold_271_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14061..14654)
DNA (594bp) protein (198aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZ85_9FIRM
L2_047_000M1_scaffold_271_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(14668..15180)
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DB36_9FIRM
L2_047_000M1_scaffold_271_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15318..16496
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27529.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_047_000M1_scaffold_271_19
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

16493..17071
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81912.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_271_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17336..17773)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GL34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26183.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_047_000M1_scaffold_271_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

17875..18942
DNA (1068bp) protein (356aa)
Sporulation integral membrane protein YtvI n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CZB1_9FIRM
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:CCX73270.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
sporulation integral membrane protein YtvI
L2_047_000M1_scaffold_271_22
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(18949..20256)
DNA (1308bp) protein (436aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.-)
tRNA nucleotidyltransferase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYX9_9FIRM
tRNA nucleotidyltransferase {ECO:0000313|EMBL:CDA81678.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_047_000M1_scaffold_271_23
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

20372..21760
DNA (1389bp) protein (463aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CZC6_9FIRM
L2_047_000M1_scaffold_271_24
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

21764..22300
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D8V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73267.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_271_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22440..24221
DNA (1782bp) protein (594aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNM8_9FIRM
L2_047_000M1_scaffold_271_26
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

24218..25645
DNA (1428bp) protein (476aa)
RNA polymerase sigma factor SigA n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D821_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
sigA; RNA polymerase sigma factor SigA
L2_047_000M1_scaffold_271_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25924..26442)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78243.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
4Fe-4S binding domain.
L2_047_000M1_scaffold_271_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26557..27906)
DNA (1350bp) protein (450aa)
CoA-transferase (EC:2.8.3.-)
Acetyl-CoA hydrolase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2B9_9FIRM
Acetyl-CoA hydrolase {ECO:0000313|EMBL:CDB27606.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_047_000M1_scaffold_271_29
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(28051..31563)
DNA (3513bp) protein (1171aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
pyruvate ferredoxin/flavodoxin oxidoreductase (EC:1.2.1.51)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CW84_9FIRM
L2_047_000M1_scaffold_271_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31784..33754)
DNA (1971bp) protein (657aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ligA; DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNY6_9FIRM
Displaying items 1-30 of 134 in total

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