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L2_047_000M1_scaffold_660

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_660_1
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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1..441
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72673.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
transporter, NhaC family (TC 2.A.35)
L2_047_000M1_scaffold_660_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(937..1353)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26665.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_047_000M1_scaffold_660_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(1411..2508)
DNA (1098bp) protein (366aa)
Amino acid racemase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTH4_9FIRM
Amino acid racemase {ECO:0000313|EMBL:CDA81237.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
amino acid racemase
L2_047_000M1_scaffold_660_4
unknown

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2756..2863
DNA (108bp) protein (36aa)

This feature has no annotations

L2_047_000M1_scaffold_660_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3081..3941
DNA (861bp) protein (287aa)
D-methionine ABC superfamily ATP binding cassette transporter binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNB8_9FIRM
D-methionine ABC superfamily ATP binding cassette transporter binding protein {ECO:0000313|EMBL:CDB27402.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L2_047_000M1_scaffold_660_6
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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3964..4968
DNA (1005bp) protein (335aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I5R1_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB44655.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
phosphonate-transporting ATPase
L2_047_000M1_scaffold_660_7
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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4961..5662
DNA (702bp) protein (234aa)
D-methionine ABC superfamily ATP binding cassette transporter membrane protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CZA4_9FIRM
D-methionine ABC superfamily ATP binding cassette transporter membrane protein {ECO:0000313|EMBL:CCX73260.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ABC-type metal ion transport system, permease component
L2_047_000M1_scaffold_660_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6030..9608)
DNA (3579bp) protein (1193aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pyruvate-ferredoxin (flavodoxin) oxidoreductase (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZD8_9FIRM
L2_047_000M1_scaffold_660_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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10053..11570
DNA (1518bp) protein (506aa)
Putative magnesium chelatase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DHB3_9FIRM
Putative magnesium chelatase {ECO:0000313|EMBL:CCX75331.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative magnesium chelatase
L2_047_000M1_scaffold_660_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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11646..12818
DNA (1173bp) protein (391aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Probable tRNA sulfurtransferase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DC25_9FIRM
thiI; putative thiamine biosynthesis protein ThiI
L2_047_000M1_scaffold_660_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12831..14114
DNA (1284bp) protein (428aa)
Putative competence-damage inducible protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRL9_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative competence-damage inducible protein
L2_047_000M1_scaffold_660_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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14101..14559
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81754.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_047_000M1_scaffold_660_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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15121..17889
DNA (2769bp) protein (923aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D078_9FIRM
L2_047_000M1_scaffold_660_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18228..18731
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99535.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L2_047_000M1_scaffold_660_15
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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18769..20103
DNA (1335bp) protein (445aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EHM4_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCX90819.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
MATE efflux family protein
L2_047_000M1_scaffold_660_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(20223..21635)
DNA (1413bp) protein (471aa)
Putative efflux protein MATE family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DC04_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDA81726.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
MATE efflux family protein
L2_047_000M1_scaffold_660_17
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(22088..23044)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ENR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02243.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Predicted permease, YCXC B.subtilis ortholog
L2_047_000M1_scaffold_660_18
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(23270..24919)
DNA (1650bp) protein (550aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ER26_9FIRM
L2_047_000M1_scaffold_660_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25070..25654)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XB04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47532.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
response regulator with putative antiterminator output domain
L2_047_000M1_scaffold_660_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25693..26904)
DNA (1212bp) protein (404aa)
Glutamine synthetase, type I n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XB05_9FIRM
Glutamine synthetase, type I {ECO:0000313|EMBL:EGJ47533.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_000M1_scaffold_660_21
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26923..27645)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YLH2_9FIRM
Glutamate synthase {ECO:0000313|EMBL:EXM37493.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
GltB; glutamate synthase domain 3
L2_047_000M1_scaffold_660_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(27687..29192)
DNA (1506bp) protein (502aa)
glutamate synthase (NADPH) GltB2 subunit (EC:1.4.1.14 1.4.1.13)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R192_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42598.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_047_000M1_scaffold_660_23
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29192..30286)
DNA (1095bp) protein (365aa)
Class II glutamine amidotransferase n=2 Tax=Clostridium RepID=B6FK93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01910.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
GltB; glutamate synthase domain 1
L2_047_000M1_scaffold_660_24
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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30609..32705
DNA (2097bp) protein (699aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DJK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA88703.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
L2_047_000M1_scaffold_660_25
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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33143..33682
DNA (540bp) protein (180aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J048_9FIRM
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDB43557.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
RNA polymerase sigma-70 factor, ECF subfamily
L2_047_000M1_scaffold_660_26
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

33672..35165
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AV31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45834.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L2_047_000M1_scaffold_660_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35426..35689
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25012.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_047_000M1_scaffold_660_28
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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35712..36698
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DT10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81042.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_660_29
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

36695..37450
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CWT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81043.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_047_000M1_scaffold_660_30
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

37447..38013
DNA (567bp) protein (189aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D7T7_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA81044.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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