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L2_047_000M1_scaffold_834

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_834_1
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(2..1024)
DNA (1023bp) protein (341aa)
Bacterial group 2 Ig-like protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D035_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:CCX72134.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
fibronectin type III domain-containing protein
L2_047_000M1_scaffold_834_2
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1246..2304)
DNA (1059bp) protein (353aa)
Spermidine/putrescine ABC transporter spermidine/putrescine-binding protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L1P8_OSCVS
potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
Spermidine/putrescine ABC transporter spermidine/putrescine-binding protein {ECO:0000313|EMBL:BAK99265.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_047_000M1_scaffold_834_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2304..3152)
DNA (849bp) protein (283aa)
ABC transporter, permease protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV88_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDN00289.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
potC; spermidine/putrescine ABC transporter permease protein
L2_047_000M1_scaffold_834_4
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3152..3964)
DNA (813bp) protein (271aa)
ABC transporter permease protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TA53_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC69100.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
potB; spermidine/putrescine ABC transporter permease protein
L2_047_000M1_scaffold_834_5
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(3954..5099)
DNA (1146bp) protein (382aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
potA; spermidine/putrescine ABC transporter ATP-binding protein (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I0X9_9FIRM
L2_047_000M1_scaffold_834_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5355..5684)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GSP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27435.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_047_000M1_scaffold_834_7
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(5727..6227)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GVH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29463.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L2_047_000M1_scaffold_834_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6339..7295)
DNA (957bp) protein (319aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
RluA family pseudouridine synthase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GIG9_9FIRM
putative pseudouridine synthase
L2_047_000M1_scaffold_834_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7427..7930
DNA (504bp) protein (168aa)
Putative ACR COG1399 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGY4_9FIRM
Putative ACR COG1399 {ECO:0000313|EMBL:CDB25262.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_047_000M1_scaffold_834_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7984..8181
DNA (198bp) protein (66aa)
50S ribosomal protein L32 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GVE7_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rpmF; 50S ribosomal protein L32
L2_047_000M1_scaffold_834_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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8711..10009
DNA (1299bp) protein (433aa)
Putative FeS-containing Cyanobacterial-specific oxidoreductase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CY28_9FIRM
Putative FeS-containing Cyanobacterial-specific oxidoreductase {ECO:0000313|EMBL:CDA81423.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_834_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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10022..11350
DNA (1329bp) protein (443aa)
GTPase (EC:3.6.1.-)
GTPase Der n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2V3_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L2_047_000M1_scaffold_834_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11340..11999
DNA (660bp) protein (220aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZF5_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_047_000M1_scaffold_834_14
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

12034..12966
DNA (933bp) protein (311aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CZ05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81420.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_834_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

12971..13219
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81293.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Copper chaperone
L2_047_000M1_scaffold_834_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13395..14036)
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R5N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63859.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
membrane protein
L2_047_000M1_scaffold_834_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14047..15588)
DNA (1542bp) protein (514aa)
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
4Fe-4S binding domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GM69_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDB26533.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_047_000M1_scaffold_834_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15787..17433)
DNA (1647bp) protein (549aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30199.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
resolvase family site-specific recombinase
L2_047_000M1_scaffold_834_19
unknown

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comp(17418..17603)
DNA (186bp) protein (62aa)

This feature has no annotations

L2_047_000M1_scaffold_834_20
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(17721..18380)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UFS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69637.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L2_047_000M1_scaffold_834_21
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(18377..19036)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TIV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69634.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L2_047_000M1_scaffold_834_22
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(19052..22399)
DNA (3348bp) protein (1116aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TP14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69631.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L2_047_000M1_scaffold_834_23
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(22418..22999)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6T890_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69628.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L2_047_000M1_scaffold_834_24
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(23116..23943)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UFR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69622.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L2_047_000M1_scaffold_834_25
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(24005..24532)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D310_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74533.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_834_26
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(24636..25385)
DNA (750bp) protein (250aa)
SipW-cognate class signal peptide n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DF87_9FIRM
SipW-cognate class signal peptide {ECO:0000313|EMBL:CCX74531.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Displaying 26 items

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