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L2_047_000M1_scaffold_965

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_965_1
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(242..1435)
DNA (1194bp) protein (398aa)
Alcohol dehydrogenase n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CTX5_9FIRM
Alcohol dehydrogenase {ECO:0000313|EMBL:CCX71313.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
alcohol dehydrogenase
L2_047_000M1_scaffold_965_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(1676..2212)
DNA (537bp) protein (179aa)
Putative ribosome-associated protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1T3_9FIRM
Putative ribosome-associated protein {ECO:0000313|EMBL:CCX74170.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative ribosome-associated protein
L2_047_000M1_scaffold_965_3
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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2610..4001
DNA (1392bp) protein (464aa)
Radical SAM domain protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D5T1_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CCX74169.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
radical SAM domain-containing protein
L2_047_000M1_scaffold_965_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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3998..5098
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74168.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L2_047_000M1_scaffold_965_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(5138..5989)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D7T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81039.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
LysR family transcriptional regulator
L2_047_000M1_scaffold_965_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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6288..7610
DNA (1323bp) protein (441aa)
LIVCS family branched chain amino acid:cation symporter n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZW1_9FIRM
LIVCS family branched chain amino acid:cation symporter {ECO:0000313|EMBL:CDA81040.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
LIVCS family branched chain amino acid:cation symporter
L2_047_000M1_scaffold_965_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(7787..8983)
DNA (1197bp) protein (399aa)
Predicted permease n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVN1_9FIRM
Predicted permease {ECO:0000313|EMBL:CDA81997.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Predicted permease
L2_047_000M1_scaffold_965_8
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9278..9532)
DNA (255bp) protein (85aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEX70235.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEX70235.1};; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIX3_9FIRM
serA; D-3-phosphoglycerate dehydrogenase
L2_047_000M1_scaffold_965_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9834..10760)
DNA (927bp) protein (309aa)
Site-specific recombinase, phage integrase family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQW5_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDN01461.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
integrase family protein
L2_047_000M1_scaffold_965_10
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10757..11551)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WPS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF38436.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L2_047_000M1_scaffold_965_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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12187..12555
DNA (369bp) protein (123aa)
DNA-binding helix-turn-helix protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQW3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN01459.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
helix-turn-helix domain-containing protein
L2_047_000M1_scaffold_965_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12928..13662
DNA (735bp) protein (245aa)
fabG; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQ61_9FIRM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDB27548.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_047_000M1_scaffold_965_13
unknown

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13744..14046
DNA (303bp) protein (101aa)

This feature has no annotations

L2_047_000M1_scaffold_965_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(13902..14654)
DNA (753bp) protein (251aa)
Putative Xre family DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D399_9FIRM
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:CCX74638.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative Xre family DNA-binding protein
L2_047_000M1_scaffold_965_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

15243..15476
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SGP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45926.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L2_047_000M1_scaffold_965_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

15457..15753
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DFG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74636.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_965_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15953..16834
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25991.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_047_000M1_scaffold_965_18
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17170..17874
DNA (705bp) protein (235aa)
Transcriptional regulator TetR family n=1 Tax=Roseburia sp. CAG:50 RepID=R5U5B2_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCZ64262.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Transcriptional regulator
L2_047_000M1_scaffold_965_19
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17871..21785
DNA (3915bp) protein (1305aa)
Repeat protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDC1_9FIRM
Repeat protein {ECO:0000313|EMBL:EEG88467.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
Displaying 19 items

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