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L2_047_000M1_scaffold_1872

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1872_1
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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2..232
DNA (231bp) protein (77aa)
Cell wall binding repeat 2-containing protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D320_9FIRM
Cell wall binding repeat 2-containing protein {ECO:0000313|EMBL:CCX71297.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Fibronectin type III domain.
L2_047_000M1_scaffold_1872_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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448..1311
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DA30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72721.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_1872_3
unknown

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1326..1589
DNA (264bp) protein (88aa)

This feature has no annotations

L2_047_000M1_scaffold_1872_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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1613..2470
DNA (858bp) protein (286aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Putative cobalt ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1T5_9FIRM
putative cobalt ABC transporter ATP-binding protein
L2_047_000M1_scaffold_1872_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2487..3353
DNA (867bp) protein (289aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Putative cobalt ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GM47_9FIRM
putative cobalt ABC transporter ATP-binding protein
L2_047_000M1_scaffold_1872_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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3347..4153
DNA (807bp) protein (269aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D782_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative cobalt ABC transporter permease protein
L2_047_000M1_scaffold_1872_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4175..4942
DNA (768bp) protein (256aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
truA; tRNA pseudouridine synthase TruA (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZ79_9FIRM
L2_047_000M1_scaffold_1872_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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4923..6107
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81308.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_1872_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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6121..6756
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72714.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_1872_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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6807..9146
DNA (2340bp) protein (780aa)
ATP-dependent Clp protease ATP-binding subunit ClpE n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXU6_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpE {ECO:0000313|EMBL:CCX72713.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
L2_047_000M1_scaffold_1872_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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9156..9365
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D777_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72712.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L2_047_000M1_scaffold_1872_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9379..10215
DNA (837bp) protein (279aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HKL2_9FIRM
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDB26487.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
fesA; 4Fe-4S ferredoxin
L2_047_000M1_scaffold_1872_13
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10247..10651
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AW42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA50826.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
L2_047_000M1_scaffold_1872_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(10698..11387)
DNA (690bp) protein (230aa)
yfnB; 2-haloacid dehalogenase (EC:3.8.1.2)
HAD superfamily hydrolase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DA19_9FIRM
HAD superfamily hydrolase {ECO:0000313|EMBL:CCX72711.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Displaying 14 items

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