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L2_047_000M1_scaffold_4676

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_4676_1
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(158..718)
DNA (561bp) protein (187aa)
Signal peptidase I n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6T880_9FIRM
Signal peptidase I {ECO:0000313|EMBL:CDC69613.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
signal peptidase I
L2_047_000M1_scaffold_4676_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(787..1368)
DNA (582bp) protein (194aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4E4_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative RNA polymerase sigma factor
L2_047_000M1_scaffold_4676_3
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1376..1567)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TVU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73949.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L2_047_000M1_scaffold_4676_4
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1564..3006)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TVU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73949.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
resolvase
L2_047_000M1_scaffold_4676_5
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3165..3980)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6U1F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73951.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L2_047_000M1_scaffold_4676_6
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4244..4549)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TKN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73953.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L2_047_000M1_scaffold_4676_7
unknown

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comp(4506..4643)
DNA (138bp) protein (46aa)

This feature has no annotations

L2_047_000M1_scaffold_4676_8
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4713..5204)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TVU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73954.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L2_047_000M1_scaffold_4676_9
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5275..5739)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TVU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73954.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L2_047_000M1_scaffold_4676_10
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5770..6594)
DNA (825bp) protein (275aa)
Putative phage head-tail adaptor n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UTC3_9FIRM
Putative phage head-tail adaptor {ECO:0000313|EMBL:CDC73957.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L2_047_000M1_scaffold_4676_11
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6661..8871)
DNA (2211bp) protein (737aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
RecD/TraA family helicase (EC:3.1.11.5)
Helicase RecD/TraA family n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TVV4_9FIRM
L2_047_000M1_scaffold_4676_12
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8883..9920)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6U1G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73961.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative phage-type endonuclease
L2_047_000M1_scaffold_4676_13
unknown

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comp(9924..10466)
DNA (543bp) protein (181aa)

This feature has no annotations

L2_047_000M1_scaffold_4676_14
unknown

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comp(10479..10739)
DNA (261bp) protein (87aa)

This feature has no annotations

L2_047_000M1_scaffold_4676_15
unknown

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comp(10711..10899)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_047_000M1_scaffold_4676_16
unknown

Not on your lists

comp(10850..11233)
DNA (384bp) protein (128aa)

This feature has no annotations

L2_047_000M1_scaffold_4676_17
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(11250..12029)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AE07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX40953.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L2_047_000M1_scaffold_4676_18
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12046..12408)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Anaerotruncus sp. G3(2012) RepID=R9M9B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64452.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L2_047_000M1_scaffold_4676_19
unknown

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comp(12736..13224)
DNA (489bp) protein (163aa)

This feature has no annotations

L2_047_000M1_scaffold_4676_20
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13263..13559)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VE20_9CLOT
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L2_047_000M1_scaffold_4676_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13562..14092)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9YW99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12057.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_047_000M1_scaffold_4676_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14197..14634)
DNA (438bp) protein (146aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZDP4_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDD41594.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
putative transcriptional regulator
L2_047_000M1_scaffold_4676_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14852..15592
DNA (741bp) protein (247aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Clostridium bolteae 90A9 RepID=R0BX10_9CLOT
Displaying 23 items

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