ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L2_047_000M1_scaffold_199_38

Organism: dasL2_047_000M1_maxbin2_maxbin_037_fasta_fa

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(36416..37153)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 245.0
  • Bit_score: 403
  • Evalue 1.70e-109
truA2; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 250.0
  • Bit_score: 336
  • Evalue 5.20e-90
tRNA pseudouridine synthase A n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTG3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 245.0
  • Bit_score: 403
  • Evalue 1.20e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Firmicutes bacterium CAG:176 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 738
ATGGAGAAAAATTATAAATTTGTTATCGCCTACGACGGCACTCGCTTTTTCGGCTGGGAGCATCAGCCGGACAAAGAAACCATACAGGGAAAATTAGAAGCCGTCCTGGAGCGGCTCCAGGGCCGTCCGGTGGACCTCATCGGCGCCGGGCGCACCGATGCCGGGGTCCACGCCCGGGCCATGGTGGCCAGCGTCCGCCTGGATGTGCGCCGGTCCCCGGAGGAGATTCGGGATTATATGAATCGCTACCTTCCCGACGCCATCGCCGTCCGGGAGGTGAAGGAGGCATCCGACCGCTTCCACGCCCGCTATAACGCCCTGGGCAAGACCTATCGCTATACCTGCTTCATCGGCCCCGTAAAGCCCGTGTTCGACCGCAAATATGTCACCCTGCTGGACTTCTCCCCGGATATAGCAAAGATGCGCCGTGCGGCGGAAATACTCCAGGGTGAGCACGATTTCCGGGCCTTTTGCGGCAATCCCCGGATGAAAAAATCCACCGTCCGCCTGGTGGACACCATCCAAATCGAGGAGCGCAAGGACCGTATCCTTTTCACCTTCCACGGCACCGGCTTTTTGCAGAACATGGTCCGCATCCTGGTAGGCACCCTGCTGGAGGTGGGCCGTGGCCGCTGGGAGCCGGAGTATGTGCAGGAAATTTTGGATGGCAAGGACCGCAAGCTGGCGGGCCCCACCGCCCCCCCGGAGGGTCTGTGTCTGATGAAGGTGGATTATTAA
PROTEIN sequence
Length: 246
MEKNYKFVIAYDGTRFFGWEHQPDKETIQGKLEAVLERLQGRPVDLIGAGRTDAGVHARAMVASVRLDVRRSPEEIRDYMNRYLPDAIAVREVKEASDRFHARYNALGKTYRYTCFIGPVKPVFDRKYVTLLDFSPDIAKMRRAAEILQGEHDFRAFCGNPRMKKSTVRLVDTIQIEERKDRILFTFHGTGFLQNMVRILVGTLLEVGRGRWEPEYVQEILDGKDRKLAGPTAPPEGLCLMKVDY*